| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3083 |
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| Symbol | |
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| ID | 4174855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3715870 |
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| End bp | 3717330 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638056109 |
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| Product | flagellar hook-associated 2-like |
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| Protein accession | YP_662643 |
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| Protein GI | 109899388 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1345] Flagellar capping protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAATTC AATCGCTAGG AGTAGGTTCG GGCCTTGATC TAGAGGCTTT AGTTAGCCAG
TTATTGGAAG CTGAGCGCAC GCCTAAGCAG GCTCGTCTTG ATTCTCAAGA AGAATCTTAT
GATGCTGAAA TATCCAGTAT TGGTACGCTG AAGTCTAAAA TGAAGGAATT TTTAGACAGC
GTAGATGAAC TGCGAAGCGA TGCCAACCTA AAAGGCCGAG AGCCGACGAT TAAAAACCCG
AGCGAGAACA TCGAACCGTT TACGGCTGAA GCATCAAACA GCGCAGTGGA GGCAGACTAC
GCAATCGCCG TTACGCAACT AGCCAATGGT AGTCGAATAG AAACGGATAA TGCGGTCGAT
GGAGGCTTTT CAAGCACGTC TGACTCCGTT AGTGCTCAAG CTGGTAGTTT GACATTTAAA
ATCGGCGCGA CCACTGATAC CTTTTCTATC AATGTGACAG CTGGCATGAC GCTCCAGCAA
TTGAGTTCTG CTATTAACAG CTCTGACGAC AACTTCGGTG TTCGTTCGAG CATTATTGAT
ACTGGCACTG CCTCCGGTGG TGCAAAGTTA GTATTTACCT CATCAGTTCA AGGTGAAGGT
AACGATTTAA TGATCGTTAA TGATAACAAC ATTGCCGACT TAAACAGAGT CGCGACGACT
GACTCAACGG AAACCGCTGC CTATTTAGAT CCAGTCAAAA GCGCCCAGAA CTCAAAAGCC
ACAATCGACG GTATAGCGGT TGAGAGCAGT ACCACGGAAT TTGAAAATGT TATTGAGAAC
GTTTCCTTTA CCGTGTCTCA GTTGTCAGAA TTAGATGAGG ATGGCATAAC GCCCAAGACA
TCGAATTTGA AAATAGGCTT TGATGCAGAG GGCCTAGAAG GCAAAATACG CGACTTCGTT
GATAACTTTA ATGCGTTAAA TACCCAGATT ACCACACTAA CTCGTTATGG CGCGTCAGAT
TTGGAAGAGG ATGGCGCTCT TGCTGGTGAC TCTATGATAC GAGGGATTCA GCAAGGTCTT
TCAAATATGA TCAGTGCTAA TGTTTCGTCG TCAGGGTTGG GGACGTTGTT CCAGTTGGGT
ATTGAATTTA ATGAAGACGG TGACTTGGAG ATAGGTTCAT CGGATAAGTT TGGTTTTGGT
AGTGGTGAAG ATAGACTAAA AGACGCTCTA GAAGATAGTT TTGACGATAT AGCGGCACTG
TTTGCGGATA GCGAAAACGG TGTGGCTGTT AGAATGCACG ATTATATAGA GCAGTATACA
AATTACAGTG GCTTACTGAC ATCGAGAGAG AAATCAGTAC AAGACCAGAA AGATCAGTTA
GCGGATGAGA GAGAACAATT CGAATTGCGG ATGGCCTCGA CTGAACAAAT CCTACGTGAT
AAATATTTAA ATTTAGATCA GACTGTTGCA CAGCTTAACC AAACGGGGTC AGCACTTCTG
GCATCACTAG GTTCTGCATA G
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| Protein sequence | MSIQSLGVGS GLDLEALVSQ LLEAERTPKQ ARLDSQEESY DAEISSIGTL KSKMKEFLDS
VDELRSDANL KGREPTIKNP SENIEPFTAE ASNSAVEADY AIAVTQLANG SRIETDNAVD
GGFSSTSDSV SAQAGSLTFK IGATTDTFSI NVTAGMTLQQ LSSAINSSDD NFGVRSSIID
TGTASGGAKL VFTSSVQGEG NDLMIVNDNN IADLNRVATT DSTETAAYLD PVKSAQNSKA
TIDGIAVESS TTEFENVIEN VSFTVSQLSE LDEDGITPKT SNLKIGFDAE GLEGKIRDFV
DNFNALNTQI TTLTRYGASD LEEDGALAGD SMIRGIQQGL SNMISANVSS SGLGTLFQLG
IEFNEDGDLE IGSSDKFGFG SGEDRLKDAL EDSFDDIAAL FADSENGVAV RMHDYIEQYT
NYSGLLTSRE KSVQDQKDQL ADEREQFELR MASTEQILRD KYLNLDQTVA QLNQTGSALL
ASLGSA
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