| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2935 |
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| Symbol | |
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| ID | 4174701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3557938 |
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| End bp | 3558750 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638055956 |
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| Product | TesB family acyl-CoA thioesterase |
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| Protein accession | YP_662497 |
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| Protein GI | 109899242 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1946] Acyl-CoA thioesterase |
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| TIGRFAM ID | [TIGR00189] acyl-CoA thioesterase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0609285 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATATTG ATGACCTTAT CGACGCGACA AATCACTATA TCAATAGTGA TGAACAAGAT
AGAGCCCAAC TCACTATCCC TAAAGAATGG GCCCAAGGAC GCACCGCATA TGGTGGTTTA
ACTGGCGCCT TGGTATATAG CGCTATCCGT CAAAAAGTCA GTAACGATCG AGTACTTAGA
TCGTTTGCAT GCAATTTTGT CGGCCCAGTT ATGACTGAGG CATCCTTTGA CATCGAAGTT
GAAATATTGC GAGAAGGTAG GAATGTTACG CAAGTGATAG GTAAGGCAAT TCAAGATGGT
AAGGTATGCG TGATGGTGCA AGCTGCCTTT GGTGTTTCAC GAGACTCAAA AATTGATGTA
CGCAATACTG ATACACATGC AATGCGAGCC CCTACCAAAG CAGATTTTCT GCCTCAAATC
CCTAAGATTA CGCCTAAGTT TTTACGCCAT ATAGACTTGG CTAGACAAGG TGGAGGCCTG
CCCTTTACAG GAAGTAAAGA AAGCAAAATT GATGGTTGGA TGCGATTTAC TAAACCACCA
AAAGAACTAA CTGATGCCCA TCTAATCGCT CTTATCGATG GATGGCCACC CACCACTTTG
CAAATGCTTA AATGGCCAGC ACCCGCTAGT ACTATGAGTT GGAACATAGA ATTTATTTAC
CCTCATTACA CCTTTTCCCC TAAAGACTGG TTTGCCTATC AAGTGCGCAC ACGTCAAGCC
GCAGATGGCT ACGCACAAAC TGAAGCGAAT ATATGGGATA CCCGAGGGCA GTTAATTGCA
ATCAGTAGAC AAACCATTGC AGTGTTTGAT TAG
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| Protein sequence | MHIDDLIDAT NHYINSDEQD RAQLTIPKEW AQGRTAYGGL TGALVYSAIR QKVSNDRVLR
SFACNFVGPV MTEASFDIEV EILREGRNVT QVIGKAIQDG KVCVMVQAAF GVSRDSKIDV
RNTDTHAMRA PTKADFLPQI PKITPKFLRH IDLARQGGGL PFTGSKESKI DGWMRFTKPP
KELTDAHLIA LIDGWPPTTL QMLKWPAPAS TMSWNIEFIY PHYTFSPKDW FAYQVRTRQA
ADGYAQTEAN IWDTRGQLIA ISRQTIAVFD
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