Gene Patl_2743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2743 
Symbol 
ID4174503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp3335138 
End bp3335974 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content37% 
IMG OID638055760 
Producthypothetical protein 
Protein accessionYP_662308 
Protein GI109899053 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCAAAGG TAAGTTTTCT GGATAAGAGA ATTTTCAGGC AATTTCTTGA AGTTGTCTCT 
GTAATAAGTG TCGTGGCATC GCTTGCATTT ATATTTGTTG AGATACCCAA AGATTGTAAG
CTCGTGGTCG GGGGCATATT TTTAATACTG CTTTTTGGCG TTTATGTGGC TTTGTGGGTC
AGATCTAACA ACTTGCAGCA GATTCACACT AATATCGAGG GAAGTGAAGT CACGATAAAA
AAAGGGGATA TATTTAAGCA GCCTGATTTT AAAGTCATAG CGTTTAATGA ATATTTAGAT
ACGAAAGTGG ATAACAAGAT TATATCTAGT AACTCACTGA ACGGTATATT TATTAATAGC
CATCTTGACA CTTCAGTTGT TGACCTTGAT CGTTATATCG AAAACTATCC TTTCGAAGAT
GATGATGTTG TTGGCGAAAA TCCGGAGAGG AAGAGCGGGA AAAAGAAACG TTTCGAAATT
GGCGCCATTT GTGTATATGG AGAGTATTTG TTAACAGCTT TTTCGAAATT TGACGATAAA
AACCGAGCTC GGTTAACGAT GCCGGAATAT CTCAGTTTTC TTATTAACTT CTGGGACAGG
GTGAATAGAA TCTATGCACA AAAAAGTGTT TCGGTCCCAA TTTTTGGGTC AGGGATAACG
CGGATTAAAG AGCACAAAAA TATCAGTGAT GAAGACTTGC TTAAGATCAT GCTTTGGACA
TTCAGGATTA GTGAGATGCG ATTCAAGTAT CCAGCAAAGC TAACTATTAT TATTCATCCA
GAGAAAATGG ATGCTATTAA CTTACTCGAT ATTAAATCGT CCAACAATGG GCTTTAA
 
Protein sequence
MAKVSFLDKR IFRQFLEVVS VISVVASLAF IFVEIPKDCK LVVGGIFLIL LFGVYVALWV 
RSNNLQQIHT NIEGSEVTIK KGDIFKQPDF KVIAFNEYLD TKVDNKIISS NSLNGIFINS
HLDTSVVDLD RYIENYPFED DDVVGENPER KSGKKKRFEI GAICVYGEYL LTAFSKFDDK
NRARLTMPEY LSFLINFWDR VNRIYAQKSV SVPIFGSGIT RIKEHKNISD EDLLKIMLWT
FRISEMRFKY PAKLTIIIHP EKMDAINLLD IKSSNNGL