Gene Patl_2549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2549 
Symbol 
ID4174304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp3092399 
End bp3093010 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content41% 
IMG OID638055566 
ProductGntR family transcriptional regulator 
Protein accessionYP_662119 
Protein GI109898864 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.000000803432 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGGAAGCT TACCTAATAA AATTCTTTCC GTCAGAGAGC AAATCGCTGA TGTATTGCGC 
TCAGATATTA TCTCTGGCGA ATTAGAGCCG AACACAAAGT TGAATGAACA ACAATTGGCT 
GAACGTTTTG GTACGTCTCG CGGCCCGATC AGAGACGTAT TAATTAAATT GACTAAAGAA 
GGCTTGTTAG TCAGCAAGGA CAATGTAGGG TCGTCGGTTA GCAGCCCGCT GACGCCTGAG 
TTACAAAAAC TGAGTATTGA AATTCGTCGT AAGATTGAAG AGCATGCAGT AAAGCAATTG 
GAAAACAATA TATCTGAAGC GGATTTGGCG CGTATGGATG CCATCATCGA TAAGATGCAA 
GAACACTTTG ACAAAGAAGA ATTTACTGAG CTAACCAAAA CCGATATCGA GTTTCACAAG 
TATTTTGTTG GATTGGCCGG TGGTGAAGAC TTAACCAATC TATGGTACCC AGTTGTGTTA 
CGAATGCGCA TGAACTATCA ACGTATTCGT AACTCGCAAA CATTGGTGGA CGAGCATCGC 
CATATTGTTG ACGCGCTGCG TAAAAATGAT TTGAAACTTG CTATTTCCAG TATTCGCAAG 
AATATAAAAT AG
 
Protein sequence
MGSLPNKILS VREQIADVLR SDIISGELEP NTKLNEQQLA ERFGTSRGPI RDVLIKLTKE 
GLLVSKDNVG SSVSSPLTPE LQKLSIEIRR KIEEHAVKQL ENNISEADLA RMDAIIDKMQ 
EHFDKEEFTE LTKTDIEFHK YFVGLAGGED LTNLWYPVVL RMRMNYQRIR NSQTLVDEHR 
HIVDALRKND LKLAISSIRK NIK