| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2514 |
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| Symbol | |
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| ID | 4174269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3049855 |
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| End bp | 3051216 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638055531 |
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| Product | RDD domain-containing protein |
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| Protein accession | YP_662084 |
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| Protein GI | 109898829 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1714] Predicted membrane protein/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGAAC CAATACAATC AGCTACCGAA GACGCGCCCG AAAATCCCGC TCATTTAACC
CAAAAAGAAA CACGCAATAT GGTCACGCCC TATGCGTTTC ACGTTTCTAA GTCCCTTTTC
GGTACGCCCC TAGCGCGCCC TATCAAACGC GCGTTTGCAC TAATTATAGA TGCCGCACTT
ATTGGCTTAT TAAGTCAGGC AAGTAACATT TTGCTGGCAC TTATTGCCGC TGTGACCTTT
TTTCGTGCGG GAAATCGCTT AAAGAAGAAA AAACGCTTTA ATGTCGCGCG AATTTCGCTG
CGATTTGTCA CGGCCATTTT ACTGTTTTTA ATTGCTGCAC AGAGTATTGA GTTCGTGCAG
GAGGTAATAG AAACCCCAGA CGAAAATCAA AAAATACGCT CAGAATTAGT CGAAGACGAT
GTACTCGGCG ATGTAGAGTT GGACAAGGTC GAAAATTTAG CTTTGATAGG GTTAACCGCG
AAATATCTAT TTGAAACCAA AAGCGTGGCT AAAGACATCG AATACGGTAA GTGCATTGAG
CCGTTAGTTT GCTGGACGAC TGTAGGTGAA AAACTCGCGA CGGATTTAGC GACTATGCCC
ATAGATAAAA AGGTTGCTGA AAATTTGTTT AGTGGGTATC GCGATGCAGT CAGTGACGAT
TTATCTCCTC AGCAAAAAAG CCAGCTAGAG GTTGCCATGA CACAAACGTA TGAGCGCATG
TATAGCAAAA GCGATACAAA ACAAAGCGAT ATAAAACAAA GCGAAATTGA TCAAAGTGAG
GTGAACAATA TTGACTTTGA AAACGCCGTT AAAGCACGTA CTGAAGGTGA GGCTCTCCCT
GACAACCTTG ATACTAACGA TGAAAGTAAA AAAGCTGGCC AAAGCGCTGA ACAAAAAGAA
AACGCTCAAT CCTTTTTTGA TACCTTGAGC GAAATAGAGG GCCCACGTGC ACAGGGCTCA
TCGCCACCGA GTCTTTTAGC TTGGGTACAA GGAATAGCTG CCGATCTTGG CCTTGGGTTT
GGCTGGGCGG CCTTTTATTT TAGTATTTTC ACCGCTTGGT GGCACGGACA AACCCCTGGT
AAGCGTTTAC TCGGTATTCA AGTCATTAAG CTGGATGGTA GTAGTTTGAA TTTATGGGAA
AGCTTTGGCC GCTATGGTGG TTATGGCGCA GGGATCGCGA CAGGGCTCTT GGGATTTTTA
CAAATTTACT GGGATCCTAA CCGCCAAGCA ATCCAAGACA AAATTTCTGA AACGCTAGTG
ATCGACTTAC GCAACGAGCG AGTGGAGTTT GTGCATCCTC ATACCGTACC CGAGAAATCA
TCGGTTAAAT CAACATCAAA TAAATCAACT GACAACGAGT AG
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| Protein sequence | MSEPIQSATE DAPENPAHLT QKETRNMVTP YAFHVSKSLF GTPLARPIKR AFALIIDAAL
IGLLSQASNI LLALIAAVTF FRAGNRLKKK KRFNVARISL RFVTAILLFL IAAQSIEFVQ
EVIETPDENQ KIRSELVEDD VLGDVELDKV ENLALIGLTA KYLFETKSVA KDIEYGKCIE
PLVCWTTVGE KLATDLATMP IDKKVAENLF SGYRDAVSDD LSPQQKSQLE VAMTQTYERM
YSKSDTKQSD IKQSEIDQSE VNNIDFENAV KARTEGEALP DNLDTNDESK KAGQSAEQKE
NAQSFFDTLS EIEGPRAQGS SPPSLLAWVQ GIAADLGLGF GWAAFYFSIF TAWWHGQTPG
KRLLGIQVIK LDGSSLNLWE SFGRYGGYGA GIATGLLGFL QIYWDPNRQA IQDKISETLV
IDLRNERVEF VHPHTVPEKS SVKSTSNKST DNE
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