| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2407 |
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| Symbol | |
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| ID | 4174155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2930059 |
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| End bp | 2931375 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638055418 |
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| Product | hypothetical protein |
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| Protein accession | YP_661977 |
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| Protein GI | 109898722 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAACT ATTACCTAAA ACTTGCCTTT AACAGTTTCA AACGTAACCC CATACTCACA
GGGTTAATGA TTGCGGCTAT CGCCCTTGGC ATCGGTGCAA GCATGACCAC AATCACAGTC
AATTACTTGA TGTCTGGGGA TCCTATCCCT GAAAAAAGCA GCCAGTTATT TCATGTACAA
GTCGACAGCT GGGACCCCAA TACTGGCTTT AACGATGAGC CAAACACCCC GCCTAATCAA
CTGACCTGGA CAGAAGCCAC TAACCTTGTG TCGGCGAAGA AAGCTTTTCG GCAAACCGCC
ATGGCCAAAT CAGGGGCCAT TATTCAGCCA GATAATCCGG ACATAAATCC GTTCGAGGCC
TCGATCCGCT TAGCATTCAG TGACTTTTTC CCTATGTTTA ACGTGCCCTT TAAATATGGA
AACAGCTGGG ACCAACAAGC CGACGAAGAC CGCCAACTGG TTGTCGTGTT GAGTAAAGAT
ACGAATGACA AGGTGTTTAG CGGAGAAAAC TCCGTGGGTA AAAGCATCAT CATCTTTGGC
AAATCGTTTC GCGTTATCGG CGTACTCGAT GCTTGGCAAC CCTTGCCAAA ATTTTATGAC
GTTAACAACG GCGCATTTGA CGATCCCGAA GATCTATTTA TGCCCTTCTA TCTAAAGCAA
GAACTTGAGC TGCCAAATTG GGGCAATACC AACTGCTGGA AATCCCCAGA AGGGGAAGGC
TTTCAGGCAT TTTTACAATC AGAATGCATT AACTTTCAAA TGTGGGTAGA GCTTGAAACC
GAGCAAGATA AACAAGCGTA TCTGACATTT CTGAACAATT ACGTGAATGA CCAAAAAAAG
CTTGGCCGCT TCCCTCGCCC CCTAAACAAT CAATTACTCA ATGTGATGCA GTGGATGGAC
GACCAGGAAG TCGTGGCTGA TGACGCTCAA ATTATGATGT GGCTGTCTTT CATGTTTTTA
ATAGTGTGCT TGCTCAATAC CATAGGCTTG CAACTGGCTA AGTTTAGCGC GAAATCTGCT
GAAATTGGCC TGCGCCGAGC GGTGGGCGCG ACCAAACAAG ATTTATTTTT ACAGTATACA
GTTGAGACCG GCGCGGTTGG TTTAGCGGGG GGAGCAATGG GCTTATTACT TGCCCTGCTC
GGCTTGGTGG GCATTCGCCA CCTTTACGGC GATGAGCTTA ATGATTTAGC CACATTAGAC
AGCACCATGA TTGTTACTGC ACTACTGTTG TCGTTATTTG CCAGTGTTTG TGCTGGCCTT
TACCCAACGT GGCGCGCATG CAACATAGCC CCTGCTAGTC AGCTTAAAAG TCAATAA
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| Protein sequence | MFNYYLKLAF NSFKRNPILT GLMIAAIALG IGASMTTITV NYLMSGDPIP EKSSQLFHVQ
VDSWDPNTGF NDEPNTPPNQ LTWTEATNLV SAKKAFRQTA MAKSGAIIQP DNPDINPFEA
SIRLAFSDFF PMFNVPFKYG NSWDQQADED RQLVVVLSKD TNDKVFSGEN SVGKSIIIFG
KSFRVIGVLD AWQPLPKFYD VNNGAFDDPE DLFMPFYLKQ ELELPNWGNT NCWKSPEGEG
FQAFLQSECI NFQMWVELET EQDKQAYLTF LNNYVNDQKK LGRFPRPLNN QLLNVMQWMD
DQEVVADDAQ IMMWLSFMFL IVCLLNTIGL QLAKFSAKSA EIGLRRAVGA TKQDLFLQYT
VETGAVGLAG GAMGLLLALL GLVGIRHLYG DELNDLATLD STMIVTALLL SLFASVCAGL
YPTWRACNIA PASQLKSQ
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