Gene Patl_2397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2397 
Symbol 
ID4174145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp2917252 
End bp2917518 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content49% 
IMG OID638055408 
Producthypothetical protein 
Protein accessionYP_661967 
Protein GI109898712 
COG category[T] Signal transduction mechanisms 
COG ID[COG1734] DnaK suppressor protein 
TIGRFAM ID[TIGR02419] phage/conjugal plasmid C-4 type zinc finger protein, TraR family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGGTG GTTGGGCAAA AGACGGTGCA GTACAAGACC AGATAGACGC GAGCGTTGAA 
GAAGCGGTAG CCCGCGCGAA AAGTCAGATG TTGAAAGGCG AAAGTGCTGA ATTCTGTGAA
GAATGTGATG AACCTATTCC TGAGCGCAGA CGCGTCGCAT TACCCGGGGT TCAGTTGTGT
ATCAATTGCC AAACAGAGAT AGAAAAGCAC GCAAGTGTTA CCTCCTCTAT TAATCGCCGC
GGTAGTAAAG ACAGCCAATT AAGATGA
 
Protein sequence
MAGGWAKDGA VQDQIDASVE EAVARAKSQM LKGESAEFCE ECDEPIPERR RVALPGVQLC 
INCQTEIEKH ASVTSSINRR GSKDSQLR