Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2365 |
Symbol | rnhA |
ID | 4172522 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 2880192 |
End bp | 2880653 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638055376 |
Product | ribonuclease H |
Protein accession | YP_661935 |
Protein GI | 109898680 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0328] Ribonuclease HI |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACACA TAGAAATTTA TACTGACGGT TCTTGCCTGG GTAATCCAGG GCCAGGTGGT TATGGCGCGG TGCTATTATT CAATCAGCAC AGTAAGGAAT TAAGCCAGGG CTTTGTTCAC ACCACGAATA ATCGAATGGA GCTGCTGGCC ACGATTGAAG CATTAGCTAG CCTAACAGAG ACGTGTAAAG TTGATTTAAC CACCGACAGT CAATATGTAA AAAACGGCAT CAATCAATGG ATAAAGAATT GGCGCAAGAA TGGTTGGCGT ACATCAGATA AAAAACCGGT TAAGAACGTT GATTTATGGA AACGCTTGGA TGAGCAAGTT GGTCGACATG ACGTCAAATG GCATTGGGTA AAAGGCCATT CGGGGCACCC CATGAACGAA CGATGCGACG TGTTAGCACG AGATGCGGCG TCAGGTAAGA GTTTATTACC CGATGAAGGG TTTCAAGGAT AA
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Protein sequence | MKHIEIYTDG SCLGNPGPGG YGAVLLFNQH SKELSQGFVH TTNNRMELLA TIEALASLTE TCKVDLTTDS QYVKNGINQW IKNWRKNGWR TSDKKPVKNV DLWKRLDEQV GRHDVKWHWV KGHSGHPMNE RCDVLARDAA SGKSLLPDEG FQG
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