| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2330 |
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| Symbol | |
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| ID | 4172484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2835661 |
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| End bp | 2836941 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638055339 |
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| Product | DEAD/DEAH box helicase-like |
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| Protein accession | YP_661901 |
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| Protein GI | 109898646 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTTTT CATCATTAGA TTTAGCGCCA GAATTGCAAC AAGCCATTGA TGCTTGCGGC
TATAAAAAAA TGACCCCAAT CCAGCAGCAA GCCATCGTGG TTGCTCGCCG CGGTCGTGAC
GTGTTAGCCA GTGCGCAAAC AGGTACGGGT AAAACAGCTG CGTTTGCTGT GCCTATTTTA
CAGCAAATGT TAAACAAGCC TAAAAAGACG ACACCGGGTA CACCCAGAGC GCTTATTTTA
ACGCCGACCC GAGAGCTTGC CGAACAACTA GCAACCAATA TTGCGAACTA CGCGAAATTC
ACTGACATCT CAGTCACGGC TCTTTATGGC GGCGTAAAAT TAGGCGGCCA AGCCAGTAAA
TTAAGCGCTG GTGTGGACAT TGTTATTTCG ACTCCTGGGC GATTATTGGA GCACATGACG
TTGAAAAATG TCGAATTGGC TAACGTTGAA TTTGTGGTCC TCGATGAAGC CGATCGTATG
TTGGACATGG GCTTTATCGC CGATGTACGC CAAATGCTGG CGCAAATCAC CTCTGCTCAC
CAAACATTGT TATTTTCAGC GACCATTTCC CCTACCGTGA ACGAGCTTGC CCATAAGCTG
CTTAAAAATC ACCAAGAGAT TCGCGCCACG CAATTAAACA GTGCCGCGGA TACCGTGCAG
CATGTGATGT ATCCTGTGTC TGAAGAAGAC AAAATTCGTT TGTTCAAGAC GTTATTAGCT
GAGCAAAACT GGTATCAGGT ATTGGTCTTT ACCAGTACTA AAGAGCAAGC GGATAAACTG
ATGGCCGCTC TTAAAACCAG TAAAATTGAT GCTGCAGTTT GCCATGCTGA TAAAAGCCAG
GGCGCGCGCC GCCGTGCAAT CGCAGATTTT AAATCAGCCA AATTACAGGT CCTTATTGCA
ACGGAAGTGG CGGCCCGCGG CCTAGATATT CAAGGCCTTG ATTATGTAGT GAATTACAAC
TTACCTTACT TACCAGAAGA TTACGTGCAC CGTATTGGGC GTACAGGTCG CGCTGGGCAG
CAGGGTAATG CTATTTCATT TGTGAGCCGT GAAGAAGAGC GCACAGTAGA GAGGATAGAG
CGTTTAATTA ACGGCAAAAT CAAACGTATT TCACGCCCTG ACTTTGCATT TAGTAGCCGC
GAATCTTTAC TTAAAACGGT GCGTAAACAC AGTAAAAACA GCCGTACTAA CAAGGCATCG
CAGACCGTCA TTCGTATGGA TAAAAGCGCT ACTAAGACAA AGCCAAAAGC AAAACCTAAG
GCAAAACGAA CGAGTAAATA A
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| Protein sequence | MNFSSLDLAP ELQQAIDACG YKKMTPIQQQ AIVVARRGRD VLASAQTGTG KTAAFAVPIL
QQMLNKPKKT TPGTPRALIL TPTRELAEQL ATNIANYAKF TDISVTALYG GVKLGGQASK
LSAGVDIVIS TPGRLLEHMT LKNVELANVE FVVLDEADRM LDMGFIADVR QMLAQITSAH
QTLLFSATIS PTVNELAHKL LKNHQEIRAT QLNSAADTVQ HVMYPVSEED KIRLFKTLLA
EQNWYQVLVF TSTKEQADKL MAALKTSKID AAVCHADKSQ GARRRAIADF KSAKLQVLIA
TEVAARGLDI QGLDYVVNYN LPYLPEDYVH RIGRTGRAGQ QGNAISFVSR EEERTVERIE
RLINGKIKRI SRPDFAFSSR ESLLKTVRKH SKNSRTNKAS QTVIRMDKSA TKTKPKAKPK
AKRTSK
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