Gene Patl_2289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2289 
Symbol 
ID4172443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand+ 
Start bp2791181 
End bp2791795 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content48% 
IMG OID638055298 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_661860 
Protein GI109898605 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGATT TAGCTCTTCT CGCGGTATTT ATTCCCACTT TCTTTTTCGT TTCTATTACA 
CCTGGTATGT GTATGACATT GGCCATGACC TTGGGTATGA GCGTGGGTGT ACGCCGCACA 
ATGTGGATGA TGATAGGTGA AGTCGTTGGT GTTGCCCTTG TCGCTATTGC CGCCGTCATC 
GGTGTGGCCA GTGTGATGCT CAACTACCCA AGTGTTTTTA ACGTGTTCAA ATGGGTGGGC 
GGCGCATATT TAGCTTACTT GGGGCTCAAG ATGTGTTTTG CTCATAATAA GGTCACCACA 
GATCATAACC CTACTTTTAC CTCTCGCGGG AAGCTTGCGT CACAAGGCTT TATTACCGCC 
ATTGCTAATC CCAAAGGTTG GGCGTTTATG GTGACCCTTT TACCGCCCTT TATTAGCGTA 
ACCCAATCCC TTACTGGGCA ACTTGTTGTG CTGGTGAGCT TGATCATGCT CAGTGAGTTT 
TTGTGTATGC TTATTTACGC CACCGGCGGC AAAAGCCTGC GCTTATTTTT AAATCGCGGT 
AACAACATCC GCTGGATGAA CGCCATCGCT GGTAGCTTGC TAATTGGCGT TGGCGCCTGG 
TTAGCCTTTA TTTAG
 
Protein sequence
MPDLALLAVF IPTFFFVSIT PGMCMTLAMT LGMSVGVRRT MWMMIGEVVG VALVAIAAVI 
GVASVMLNYP SVFNVFKWVG GAYLAYLGLK MCFAHNKVTT DHNPTFTSRG KLASQGFITA 
IANPKGWAFM VTLLPPFISV TQSLTGQLVV LVSLIMLSEF LCMLIYATGG KSLRLFLNRG 
NNIRWMNAIA GSLLIGVGAW LAFI