| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2142 |
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| Symbol | |
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| ID | 4173397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2592313 |
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| End bp | 2593287 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638055150 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_661714 |
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| Protein GI | 109898459 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTACAAAG TGACTATTTT GGGATTCGAT CAAGCCTACG CTAGTGCTAT CACTGGGGTG
CTAGATATAT TTGGTTTAGC AGGTATTACT TGGCAGCGGA TGCAGGGATT ACCCATCAAA
CCGCTGTTTG ATGTTCAAAT AGCCTCGTTA TGCCAAAAGC AGGTTAAATG TATTAATCAG
CTTGAATTGA ATGCCCATGT GTCAATAGAA AGCGTAGACA AAACGGATCT CCTCCTTATT
CCTACCATTG GTGGTGATCC CATTGATGTC CTTAAAAATA ATGTTGAACT CTTAGCCCAT
ATAAGAAAAC ACCACGCTTT AGGAGCAGAT ATCGCGAGTA ACTGCAGTGG CGCTTTTTTT
TTAGCTCAGG CAGGAATACT TGACAAGCGT ATGGCAACAA CACATTGGGG CTACGCAGAC
TTATTTAGGC AGCTATATCC CAATGTTAAT TTGCAAATCG ATAGAATGAT CACCGAGCAA
GACAACATTT TTTGTTCAGG CGGAGGAATG GCGTGGTTTG ATTTAGCACT CTTATTGATC
GAGCGTTACG CTGGCCATGA TATCGCGACC ACAACAGCCA AGGCTCACGT TATCGATTTA
TCTCGTGGGG ACCAATCTGC TTACGCTTCT TTGCGCACTA AGAAATACCA TCAGGATGTG
GAAATTCTCG CTGTACAACA GTGGCTTGAG GAGCATTTCG CGCAAAAAAT TGTGGTAGAC
ACCTTGTGCG AAAAAGTAAA TTTAACATCT CGTACTTTTG TTCGCCGCTT TAAGCGCGCA
ACGGAACAAT CCCCCCTAGC TTACCTGCAA GGTGTGAGAG TTGAAGCAGC TAAAAAGCAT
TTAGAAGCAT CTGCTCATAG CGTAGAGCGC ATTGTGAATC TCGTGGGTTA CGATGATTTG
AGCTCATTCA CCCGACTTTT CAAAAAACAC ACTGGTTTGT CTCCCAGCCA ATACGGGAAG
AAATTTAGAC GTTGA
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| Protein sequence | MYKVTILGFD QAYASAITGV LDIFGLAGIT WQRMQGLPIK PLFDVQIASL CQKQVKCINQ
LELNAHVSIE SVDKTDLLLI PTIGGDPIDV LKNNVELLAH IRKHHALGAD IASNCSGAFF
LAQAGILDKR MATTHWGYAD LFRQLYPNVN LQIDRMITEQ DNIFCSGGGM AWFDLALLLI
ERYAGHDIAT TTAKAHVIDL SRGDQSAYAS LRTKKYHQDV EILAVQQWLE EHFAQKIVVD
TLCEKVNLTS RTFVRRFKRA TEQSPLAYLQ GVRVEAAKKH LEASAHSVER IVNLVGYDDL
SSFTRLFKKH TGLSPSQYGK KFRR
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