Gene Patl_1986 details

Gene Information

• Locus tag: Patl_1986
• ID: 4172121
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: +
• Start bp: 2415612
• End bp: 2416226
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 638054994
• Product: GrpE protein
• Protein accession: YP_661558
• Protein GI: 109898303
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0576] Molecular chaperone GrpE (heat shock protein)

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTAACG AAGAGCAAGC TCAAAAAGAT GACGCCCAGC CGGTCAATGA AGCCGCTATC 
GACGCCACTG CGGAACAAGC AGATGCAGAG GTTGAAGAGT TAAGCGCTGA GCAAGCACGT 
ATTCTTGAGC TTGAAGCAGC ATTAGCCGCA TCGGAAGCCA CGTTAGCTGC ACAAAAGGAC 
TCAGTTATGC GTGCCATTGC CGATGCCGAC AACGTACGTA AACGTGCTGA AGGCGAAGTC 
GATAAAGCAC GTAAATTTGC CCTTGAAAAG TTCGCATCAG AGCTTTTACC CGTTGCAGAC 
AACTTAGAGC GTGCACTGCA AGTGGCAGAT AAAGAAAACG AAGCGATTAA ACCTGTGATT 
GAAGGCGTGG ACATTACCCT TAAATCATTT GTGAGCAGCA TCGAAAAATT CGGAATGAAA 
GTTATCGATC CACAGGGAGA AACTTTTAAT CCAGAACAGC ATCAGGCTAT GTCGATGCAA 
GAAAACGCAG AATTGCCTGC TAATACAGTG ATGGCAGTGA TGCAAAAAGG TTACGAATTA 
AATGGTCGTC TTTTACGTCC AGCAATGGTG ATGGTATCCC GTGCCCCTGA AGGCGGCGTT 
GATACCCAAG CTTAA 

 

Protein sequence

MSNEEQAQKD DAQPVNEAAI DATAEQADAE VEELSAEQAR ILELEAALAA SEATLAAQKD 
SVMRAIADAD NVRKRAEGEV DKARKFALEK FASELLPVAD NLERALQVAD KENEAIKPVI 
EGVDITLKSF VSSIEKFGMK VIDPQGETFN PEQHQAMSMQ ENAELPANTV MAVMQKGYEL 
NGRLLRPAMV MVSRAPEGGV DTQA