Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1823 |
Symbol | |
ID | 4172071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 2192680 |
End bp | 2193705 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638054832 |
Product | LacI family transcription regulator |
Protein accession | YP_661397 |
Protein GI | 109898142 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.288921 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAAGTA ACAAAAAATT GACCTTGAAC GACTTGGCTG GTCTGGCTGG GGTGTCTGCA TCTACAGTAT CTCGCGCGTT GAGTGACAAC CCTTTGATTA AAAAAGACAC GCGGGTACGC ATTCAAGCGT TAGCGGCGTC ACACAATTTT AGTATCAATA CCGCCGCAAG TCGTTTACGC ACCCAAAAAA CCAAAGTAGT GGCGGTTATT CTTAACCTAA TCGATCACAC TGAACAGAGT ATCAGCGACC CGTTTTTATT GAAAATTGTG GGCGATCTAA ACCAAGCCTT AAATACCAGA GGCTATGACT TATTGTTATC TAATTCGTTT ATGGCCACAG ACAATTGGGC TAACTATTTT ATTAACAGTC AGCGTGCAGA TGGTCTTATC GTTGTAGGCC AAGGCAAGAG TGATGAAAAA GTAAAAGAAG TGGCTGAATC TGATGTACCT ATGGTGGTAT GGGGCGATCC AAAAACCGAG TCTAATTATG CCGCTGTCGG CAGTAATAAT CATTTAGGCG GCGAGATCGC CACACAACAT TTGATTACTG GTGGATGCAA AAATATCTTA TTCTTGGGCG ACCCTGAGCA TATGGAGATG ACTGGACGTT ACCGGGGGTA TCAAGATGCG CTTGAAGCGC ACTCGATCAC ATTTGACCGG GCATTCACCG TCGCATGTGA CATTACTAGC AGTGCAGCAT ATGCCAAAAT CAGTGAACTT ATTTTATCCA AAGGGCTGTT TTTCGACGGC ATCGTCGCTT GTAGCGATAT GGTTGCCTTA GGCGCAATGC GCGCATTGAA AGAACGTTAC ATTGGCATTC CTAGCGACGT TGCTATCGTT GGGTTTGATG ACATTATGAT GGCTGAATTG TCGTACCCTT CATTAACAAC GATTAAACAA AATACCCAGC GTGCTGCACA AGTGATGGTC GACAAGCTAA TTGCGCAGTT TGAAGGTAGA AAAGTCGACT CTTCTTTGAT AGACATCGCA CTAGTGGCGC GTCAATCAAC GAAACATAAC CCGTAA
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Protein sequence | MKSNKKLTLN DLAGLAGVSA STVSRALSDN PLIKKDTRVR IQALAASHNF SINTAASRLR TQKTKVVAVI LNLIDHTEQS ISDPFLLKIV GDLNQALNTR GYDLLLSNSF MATDNWANYF INSQRADGLI VVGQGKSDEK VKEVAESDVP MVVWGDPKTE SNYAAVGSNN HLGGEIATQH LITGGCKNIL FLGDPEHMEM TGRYRGYQDA LEAHSITFDR AFTVACDITS SAAYAKISEL ILSKGLFFDG IVACSDMVAL GAMRALKERY IGIPSDVAIV GFDDIMMAEL SYPSLTTIKQ NTQRAAQVMV DKLIAQFEGR KVDSSLIDIA LVARQSTKHN P
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