Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1683 |
Symbol | |
ID | 4172274 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 2013447 |
End bp | 2014274 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638054692 |
Product | phytanoyl-CoA dioxygenase |
Protein accession | YP_661258 |
Protein GI | 109898003 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGTCTG TCGATCAGAA AAATGAATTT CGAGCCCAAG GGTATATCGT ATTAAACCAG CTTTTTTCCA CGGCAGAAAT GGCCTCTTTA AAAAGTGAAG CTGAATCTAT TGTTGAGTTG TTCGACCCTA ATTCAACTCG TGCTGTTTTT TCTACCCAAG ATCAGAGCAA ATCAAGAGAT GATTACTTCT TACAATCAGG CGATAAAATC CGCTGTTTTT TTGAAGAGGA AGCCTTCGAC GAGAAAGGCG ACTTGAAGCA AGCTAAGGCA GTAAGCATTA ACAAAATTGG CCATGCCCTG CACACGCTAA ACCCCGTATT TAAAGCATTC AGCCACGATC CTAGGATCAG ACAATTAGCA AGAGATGTAG GGTTATTCAA ACCGCAAATT CATCAATCTA TGTATATTTT TAAACAGCCG AAGATAGGAG GAGTGATCCG CTGGCATCAA GACGGCACCT ATTTCTTAAG CGACCCCTTG TCCGTAGTGA CATTTTGGTT TGCAGTGGAA GATGCCACAA TTGAAAATGG CTGCTTACAA GTTAAGGCCG ATGGCAGTGA TACGCCTCTG CGCGAGCAAT TTATGCGCTT TACCGATGAC AGCACAGAAT TAAAAGTGCT AGATGACACC CCTTGGCCAA AAGATGAAGA TGCAAAACCT TTAGAGGTAA AGAAAGGTTC GCTGGTGGTA TTTGATGGGT TACTGCCGCA TTTTAGTGCG CCAAATCGCT CGGAGAAATC ACGCCATGCT TTTACGCTGC ACATGACGTG TGCTACCACA AAATATGACC CGCTAAATTG GTTACAAGCC TCGCCCAGTC TTCTGTAG
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Protein sequence | MLSVDQKNEF RAQGYIVLNQ LFSTAEMASL KSEAESIVEL FDPNSTRAVF STQDQSKSRD DYFLQSGDKI RCFFEEEAFD EKGDLKQAKA VSINKIGHAL HTLNPVFKAF SHDPRIRQLA RDVGLFKPQI HQSMYIFKQP KIGGVIRWHQ DGTYFLSDPL SVVTFWFAVE DATIENGCLQ VKADGSDTPL REQFMRFTDD STELKVLDDT PWPKDEDAKP LEVKKGSLVV FDGLLPHFSA PNRSEKSRHA FTLHMTCATT KYDPLNWLQA SPSLL
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