Gene Patl_1643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1643 
Symbol 
ID4174072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp1958543 
End bp1958869 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content43% 
IMG OID638054653 
Producthypothetical protein 
Protein accessionYP_661219 
Protein GI109897964 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.947428 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGTTAA TTGATTGCCC ATCGTGCAAT AAGAAAATCT CTGACAAAAC CGAAGAATGC 
AATCACTGCG GTTTCGCCAT GGGGCATGCG AGCGATGAAG ATATTGCCCG CAAACGCAAT
TTACAAAAGT ACCTGAAATC ACAAAAAATC CAAACCCAGT CAATGATAGC CATGCTGATG
TTTGTCTCAG GGTTTGGATT TATGTATTGG GGCGGAGCTG CTCCAGGTGA AGTGCAATAT
AATATTGCTG TGGGTGTCGC GATTATCGGT TTTGTTTGGT ACATCATCAA TCGTGTGCGT
CTCGTTTTTG TTAAGAAGTC TAATTAA
 
Protein sequence
MALIDCPSCN KKISDKTEEC NHCGFAMGHA SDEDIARKRN LQKYLKSQKI QTQSMIAMLM 
FVSGFGFMYW GGAAPGEVQY NIAVGVAIIG FVWYIINRVR LVFVKKSN