| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1621 |
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| Symbol | |
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| ID | 4174050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1927727 |
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| End bp | 1928620 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638054631 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_661197 |
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| Protein GI | 109897942 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGTTT CGTATCGCCA ACTACAAGCG TTTATACAAG TGGCGCAATC GGCAACGTTT
GCTGAAGCTG CGCAAAAGAT GTTTCTTTCG CAGCCTGCGC TGTCCAGTGC CATCAAAAAA
ATGGAAGAGC AAGTGGGTGG GGGGCTGTTT TCACGCACCA CACGTAAGGT GCAACTCAGC
CCTGAAGGCC AGGACTTCTT ACCTGTAGCA ATACGCTTGA TGAATGACTG GCAAGATGCA
TTTGGCGACT TGCAGCAAGT GTTTTCAATG GGAAGAGGAA AGTTGTCTAT CGCCGCGATG
CCCTCGTTTG CTGTAGGGCA TTTACCGGCG ATTCTAGGAG CGTTTCAATC TCAGTTTCCT
AACGTCAAGG TCGCCGTGGC GGATATTGTA ATGGAGCAAG TCATCAATGC CGTTTCTGAG
GAACGAGTAG CGCTGGGTTT TACCTTTGAA ACCGAACAAT TAGACGGCCT ACTGTTTCAT
CCCATGTTCA CCGACGAGTT TATTGCCGTG CTGCCAAAGT TACACCCGTT GAGTCAGCAA
AGCAGCGTCA CGTGGAATGC GTTAGCGCAG TCTCCCTTTA TTGCCATGAA TAGAGGGTCG
GCCATTCGCA GATGGGTCGA CAACCATTAC GAAGCGCTAG AGCTCAAGGT AAATATGGTG
GCTGAGGCAT CGCAATTAGC GACACTGGGG CAATTTGTAG AGCATGGTTT GGGGGTGTCT
ATTGTGCCTG GGCTATGTCA GCAGCAAATG CAGCGACTTG GATTGAGGTG CTTACCGATC
GAAGGAGACA GATTGAGTAA GCGAGTGGGG ATGATTAAAA AGGTGCAGGG CAATATGTCC
GTTTCGGCGC AAGCCTTGTG GGACTGGGTG ATAAAGCAAT CATTAGCAGA GTGA
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| Protein sequence | MNVSYRQLQA FIQVAQSATF AEAAQKMFLS QPALSSAIKK MEEQVGGGLF SRTTRKVQLS
PEGQDFLPVA IRLMNDWQDA FGDLQQVFSM GRGKLSIAAM PSFAVGHLPA ILGAFQSQFP
NVKVAVADIV MEQVINAVSE ERVALGFTFE TEQLDGLLFH PMFTDEFIAV LPKLHPLSQQ
SSVTWNALAQ SPFIAMNRGS AIRRWVDNHY EALELKVNMV AEASQLATLG QFVEHGLGVS
IVPGLCQQQM QRLGLRCLPI EGDRLSKRVG MIKKVQGNMS VSAQALWDWV IKQSLAE
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