Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1550 |
Symbol | |
ID | 4172542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 1855822 |
End bp | 1856346 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638054559 |
Product | hypothetical protein |
Protein accession | YP_661126 |
Protein GI | 109897871 |
COG category | [S] Function unknown |
COG ID | [COG3542] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.13534 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGCAA ATCCCCCCGT ACCCCAGCTG AGCAAAGAGC AAGTCATATC TCAGCTCAAG TTATCTCATC ATTTTGAAGG AGGATATTTT CGCCAAACAT TCAAAGCCAA TCACAGAGAC AAAGTCACGA CCCCTCGAGG TGACAGAACC ACTATGACGG CTATTTTCTA CATGCTGACC GACGACAACA ACATTGATCA TTTTCACACC AAGCACTCTG ATGGCATTGA GTTTTATCAT ATGGGTGCGC CAATCACGTA TCACATGATT TATCCTGATG GGCGATACGA GAAAGTGGTC GTTGGGCCTG ATATCCAAAA CGGTCAGCAA CTACAACTCG CCGTTCCTGG TGGAACCTAT AAAGCGGCTG AATTGCTTGC TGGCACATAC GGTTTGGTCA GTGAAGCGGT AGCCCCCGGT TGGGAAAAAG AAGATATGAT AGAAATAAAC CGTGAAGCAC TACTCGAAAA ATTCCCCCAA CATAAAACGA TAATAGACCG CTTGGCGAAT AAGAATAAGC ACTAG
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Protein sequence | MAANPPVPQL SKEQVISQLK LSHHFEGGYF RQTFKANHRD KVTTPRGDRT TMTAIFYMLT DDNNIDHFHT KHSDGIEFYH MGAPITYHMI YPDGRYEKVV VGPDIQNGQQ LQLAVPGGTY KAAELLAGTY GLVSEAVAPG WEKEDMIEIN REALLEKFPQ HKTIIDRLAN KNKH
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