Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1537 |
Symbol | |
ID | 4172986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 1843573 |
End bp | 1844391 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638054546 |
Product | response regulator receiver protein |
Protein accession | YP_661113 |
Protein GI | 109897858 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | [TIGR01764] DNA binding domain, excisionase family |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCGTAT CTCAGAATCA TATTGCCAAA TACATCAAGA TCACTCGCAA TCGCTGCACT GGGTACTGCA CTGAGCGCTA TGAGTACTCG CAACATAAAC TTCTCCATCG AAAACTCCTT GCCATCACAG ATAACATTAA ATTCGTGAGA CTAATAATTA CACAATGTCA CTATTGTCAC ATATTACACT TTAGTCCTAT TTGTCATTTT AGTCATAAAT GGTATAAACT AATCATACGT AATGACAGCC AAGAGAAATC AATGAAAACA TTAACCTCCG GTGAAATAGC GAAGTACTGT GACGTTAATT TGCGCACGGT TATCCGCTGG ATTGATAGTG GCAGACTCAA AGGCTACAAG TTGCCTGGTG GTGGTAATAA CCGTGTGAAA GAAGAAGATT TTCTCGCATT TTTGCAAGAT AACGAGCTAC CTATCCCTAC TGAGTTTCAA ACAAAAGAGA CACGTGTGTT GATAGTTGAC GATGAATTGC AAGTGGCAAA AGCCATAAGC CGAGTAACCA CTCGCGCCGG CTTCAAAAGT GTTATAGCGA CAGACCCTTT TATGGCAGGT GCGTTGTTGA CCAGTTTCAA ACCGCAGTTA ATGACACTCG ATTTAAGCAT GCCTGGGGTT AACGGTTATG ACATCGTTAA ATTTGCCCGC CATGATTACG ACGATAAATC GTTGAAAATA CTAATTATTT CAGCCCTAGG AGAAGAGCAA CGACAACAGG CAGTCGATTT GGGCGCTGAT ATGTCACTGT CTAAACCATT TTCAAACAAA GAATTACTAA ACACGATTGA AAGCCTGCTG GTTAAATAA
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Protein sequence | MFVSQNHIAK YIKITRNRCT GYCTERYEYS QHKLLHRKLL AITDNIKFVR LIITQCHYCH ILHFSPICHF SHKWYKLIIR NDSQEKSMKT LTSGEIAKYC DVNLRTVIRW IDSGRLKGYK LPGGGNNRVK EEDFLAFLQD NELPIPTEFQ TKETRVLIVD DELQVAKAIS RVTTRAGFKS VIATDPFMAG ALLTSFKPQL MTLDLSMPGV NGYDIVKFAR HDYDDKSLKI LIISALGEEQ RQQAVDLGAD MSLSKPFSNK ELLNTIESLL VK
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