| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1533 |
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| Symbol | |
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| ID | 4172982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1838107 |
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| End bp | 1839600 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638054542 |
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| Product | histidine kinase |
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| Protein accession | YP_661109 |
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| Protein GI | 109897854 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCTAAAT CGAACGAGGA ATTAGAGGCA AGGATCGCCG TTTTAGAGCG TAAAGTCGAG
CGAGAAAAGA AAGCCCGAGT GATGTCTGAA CAGCACTTAG AGGTGCACTC TCGCGCACTG
TATGAAACCA ATCAGTCGTT GCAGACTTCC TTGGCGATGG CTAAGAAAAA ACAAGCTGAG
CTAGAGTTTT TACGCCAAAC CTCAGGTGAC GTCTCCTCGG ATATATCGTT GCAAGAGCTG
ATAACGAATA CGGTGGAGTT GACTGGGCAA TTTTTTTCGG TGGAATGTGG CATGTTTATC
GTGACGCAAA ATGGCCAAGC GTTAGAATCT AAAGTCGACA ATATTTGGCG GGCGCCAAAT
GAGTGGGTCT CTGACAAAGC ATTCTTACAG CAAGCAACAC AGTTCTTACC CATTCAACAG
CAAGAATGCC TGAGTATGTG GTTGGTCTCA GCTATCGATG AACAATCTAG CCAAGCATTA
GCCGGATTCA AATGGATAGT GTTTGTTAAC TTTGAATTAC TCGGAAATAA AATTGCATGG
TTAGCGTTTT TTAGCCGAGC GGAATATTTA GACGAAGAGG CGCTCTCTGT GCTCAGCACA
GCCAGAGAAC ACCTGTTAAG CGGCATTACG CGGCGCATTA CTGACGTAAG TATTCGAAAG
CGTACGGTGG AACTGCAAGA CACGGTGAAC CGCTTAGAGC AGGCTAAACA GCAACTCATT
CAATCAGAAA AAATGGCCTC TTTAGGGCAG CTTGCCGCTG GCGTTGCCCA TGAAATTAAT
AACCCAGTGG GCTTTATTCG CTCAAATCTA GAGATGCTCG AAGAATACCT ACAAGATTAT
CAGCAATTAC ATGCGTTAAT TTTAAAGCAA ATTGGTATCT CGGGGCAGTT GGATGCAGCG
CAATACAAGT CATTATGTGA AAACATTGAT TTAGTCTACA TACAACAGGA TGCCAAAGAT
TTACTGGCAT CGAATTTAGA AGGGTTAGAC AGGGTAAAAG AGATCGTTGA GAACTTGAAA
ACCTTTTCTC ACAGCGGTGA TGGCAAACTA GACAAAATAG ACATTAAAGC TTGCATCGAA
GGGGCGCTAA AAATCGCTTG GAATGCCCTT AAATATGAGC ATGTAGTGGA TAATTTGTTG
CCGGAGGATT TACCAGAAGT ACTTGGAAAC ATCGGGCAAC TGCAACAAGT TTTTGTGAAC
TTATTTGTGA ATGCCGCTTA CGCCATGTCA AAGGGCGGCA AGCTAACGAT TAAATCAAAA
CTGACCCCCA GGGTATTATT GATAGAGGTG ATCGATAATG GCTGTGGCAT GGACAAAAAA
ACACTCGACC AGTTATTTAC ACCGTTTTTC ACCACTAAGC CTGTAGGCGT AGGGACAGGT
TTAGGGTTGT CGGTGTCATA CGCTATTCTC GAGTCACATA ACGTGCATAC ACAAGTGCAA
TCTACTGTAG GTAAAGGAAC TCAATTCTCT CTTAGTTTTC CTCTACCTCA GTAG
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| Protein sequence | MAKSNEELEA RIAVLERKVE REKKARVMSE QHLEVHSRAL YETNQSLQTS LAMAKKKQAE
LEFLRQTSGD VSSDISLQEL ITNTVELTGQ FFSVECGMFI VTQNGQALES KVDNIWRAPN
EWVSDKAFLQ QATQFLPIQQ QECLSMWLVS AIDEQSSQAL AGFKWIVFVN FELLGNKIAW
LAFFSRAEYL DEEALSVLST AREHLLSGIT RRITDVSIRK RTVELQDTVN RLEQAKQQLI
QSEKMASLGQ LAAGVAHEIN NPVGFIRSNL EMLEEYLQDY QQLHALILKQ IGISGQLDAA
QYKSLCENID LVYIQQDAKD LLASNLEGLD RVKEIVENLK TFSHSGDGKL DKIDIKACIE
GALKIAWNAL KYEHVVDNLL PEDLPEVLGN IGQLQQVFVN LFVNAAYAMS KGGKLTIKSK
LTPRVLLIEV IDNGCGMDKK TLDQLFTPFF TTKPVGVGTG LGLSVSYAIL ESHNVHTQVQ
STVGKGTQFS LSFPLPQ
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