Gene Patl_1496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1496 
Symbol 
ID4172222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp1795698 
End bp1796423 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content45% 
IMG OID638054506 
Productabortive infection protein 
Protein accessionYP_661073 
Protein GI109897818 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.814681 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTAC ATATTTGGAC ACTCTCAATG GCGTGTGTCG TCTTAGCCGT GCCTATTTAC 
TGCCTGTGGG AAGGCAATAA GACGCAACAG GATGTTACAT CAGGCAAACA AACGCGGTTG 
GGGGCATATG TTTCCACCAT AGTGCTGCTG TGGATACCTA CCTTATATTT ATTGATAGGC 
ATGAGTTTGG GTAAGGTGAA TACTGCCGAC CTTTCATTAG TGTGGGCGGG TAGTCTCAAC 
AACTGGTTAG GTGCAATGGG GCTATTACTG ATAATGGGCT ATTTTGCCTC TAGTCTATTT 
TCAGTGAAGA AAACAAAAGA AACGCATCAG AACATTAGAT TGCAACTAGA CCACGTCGCG 
TGGCTTATGC CGCGAAACCT GAAAGAGCTA ACGTTATTTA CTGGGGGCCT TTCACTATCT 
GCCGGTATAT GTGAAGAACT CCTTTTTCGA GGGTTTATTT GGCAACTTCT TACACCAATT 
TTAGGGCTTT GGCCTGCACT TCTGTTGTCT AGTATCCTAT TTGGTGTCGC GCATTATTAC 
CAAGGATGGC CTCACGTGCT GCGCGCAGGT GTCATGGGAA TAGCGCTAGG GCTGGTATTG 
TGGCTTACAG AAAGTATATG GATTGCGATT GCGTTGCATG CACTCATAGA TATGTATGGT 
GGACTGCTAG CCTACCTAGT GTTTCGCACC ACTGATGTTA ATCCATTGCT TGGTGCTAAA 
GCCTGA
 
Protein sequence
MNLHIWTLSM ACVVLAVPIY CLWEGNKTQQ DVTSGKQTRL GAYVSTIVLL WIPTLYLLIG 
MSLGKVNTAD LSLVWAGSLN NWLGAMGLLL IMGYFASSLF SVKKTKETHQ NIRLQLDHVA 
WLMPRNLKEL TLFTGGLSLS AGICEELLFR GFIWQLLTPI LGLWPALLLS SILFGVAHYY 
QGWPHVLRAG VMGIALGLVL WLTESIWIAI ALHALIDMYG GLLAYLVFRT TDVNPLLGAK 
A