Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1495 |
Symbol | |
ID | 4172221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 1794544 |
End bp | 1795512 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638054505 |
Product | beta-lactamase-like |
Protein accession | YP_661072 |
Protein GI | 109897817 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAA AGCTAATTTC AGCTCTTCTG GTACTAATAT CAGGATGTTC TATTGATGCA GGTGTCAACG CGAACGAAAC CTTAAGTGCT TCATCCACAA AGCGTCACAC TGTACTAAAT AAAGAGAAAT GGATTCACGG CTCTGTTGAT TGTAAAACCA ACCAAGACCC ATCGGTTGAT ATATATAGGC ATGATGAAAC GAGCTTTATA CTTCGTCAAA ATAAGTGCCT AACCTTTGAA GCTCCCTTTG TATATGTGCT TGTTGGTGAA CGGAAGATCC TGGTATTTGA CACCGGAGCA ATGCCTGACA CTGACGGTTT TTCTCTTTAT CAAGAAATCA AAACGGCTGT TGGAGCGGAT GTTATTTCCG AGAGAGATAT ATTGGTCATT CACTCTCATG GTCACAGTGA TCATTATCAA GGCGACGGTC AGTTTGACGG GCAGCCAAAT GTCACTTTGG TTGGCCCAAC AGCTAAAGAA ATGAAGAACT ATTTTGGCTT TAATGAATGG CCTACGGGTC AAAGCACCGT GGATCTCGGT AACCGAAAGT TGACAGTTAT TCCAACACCT GGGCACCAAG AAGAGTCGAT AACGGTCTAC GACCATCAAA ATAAATGGTT GCTGACAGGG GATACTTTGT ATCCTGGGAT TATCTATATA AAGAATTGGG ATGAATACAA ACTTAGCATC GACAGACTAA ATAAATTCTC AAAGTCACAC AAAATAAATG CCATTTTAGG TGCTCATATA GAAATGGCCG CTAACCCCGG TGAGTTTTAT CAAATGGGCT CAACTTATCA ACCTAATGAG GCTCAACTGG ATTTGGCAAC GCCACATCTA CATAAACTAA ATGCCGCCCT GCAACGCTCA TCCAAAGCCG AAAAAATAGA TTTCGATGAA TTTAAGATTC AGCCAATGGG CTTACTGCAA AAATCTATCA GTAATGTTGT GCGTTGGTTC ACACAATAG
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Protein sequence | MKIKLISALL VLISGCSIDA GVNANETLSA SSTKRHTVLN KEKWIHGSVD CKTNQDPSVD IYRHDETSFI LRQNKCLTFE APFVYVLVGE RKILVFDTGA MPDTDGFSLY QEIKTAVGAD VISERDILVI HSHGHSDHYQ GDGQFDGQPN VTLVGPTAKE MKNYFGFNEW PTGQSTVDLG NRKLTVIPTP GHQEESITVY DHQNKWLLTG DTLYPGIIYI KNWDEYKLSI DRLNKFSKSH KINAILGAHI EMAANPGEFY QMGSTYQPNE AQLDLATPHL HKLNAALQRS SKAEKIDFDE FKIQPMGLLQ KSISNVVRWF TQ
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