| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1474 |
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| Symbol | |
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| ID | 4172200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1768479 |
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| End bp | 1770317 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638054484 |
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| Product | hypothetical protein |
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| Protein accession | YP_661051 |
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| Protein GI | 109897796 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3211] Predicted phosphatase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.654414 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATTC AAAATTTACG CGATATAAAA TATTCAGCCC TCGCGTTAGC GGTAGCATTT
GGTATTTCAG CCTGTTCATT GGACGGCGAT GATGGTGAAG ACGGTGCGCA AGGCGCCGTT
GGTGAGCAAG GCGAACAAGG TGCTCAAGGT GAGCAAGGTG ATACCGCAGG AAAATTAACG
CGCATTGCGA CGGTGCCTTT AGGCGCTGAA GTAACTGGTA TTTTCTTAAC CGATGAAGGG
GATCTTTTCT TTAATGTCCA ACATCCTTCC GGCACCAATG CCGTCACCAC TGAGGTAAAC
GCAAAGCCAA TTAACACAGG CACCGTAGGG GTTTTAGCGG GCGCAAACTT TAACAACCTA
CCTGTTACGC TACCTAATTC GCCAGTACCT GCCAGCGATG AAGAAAAGGA AGTGGTGGTA
TCCGCCATTG GCCAATACCA AGTCCTTGGT CAAACAGGCG ATACCTTTGG CACTGAATTA
CCTGAAGGAT TAGGGCACAT TTACACCTTA GATGGCGAGG AGTTAGTGTT AGAAAACGAT
ATGCCTGACT TTAATGGTTT TATTTCTACG GCGTCAGGTG AAGGTTATTT ATTTTCTAAC
TGGGAAGAAT TACCCGGCGG TATGAGCCGC ATGAAGATTG AGCGTGATGA TTTTGGTATG
TGGCAAGTAA CTGAAGCCAT GATGCTAGAC TTCTCCCCAG TGTGGGGAAC TGCCGCTAAC
TGTTTCGGAT CTATGTCCCC TTGGAATACC CCACTAACAT CGGAAGAATG GGTGGTAGAT
TCATCTGTTG ATTCAACCAC CTCACCTAGC TGGAATGATC CAGAAGCCGT CGCAACGGAT
GCTCGTCTTG GCCGCATGTG GCAGATGACA GCACCAGATG CGTCAAACCC GTATAACTAT
GGTTACATAG CAGAAGTCAC CGAGCCTCTT GCTGATGAGC CTGTCATTGT TAAGCATTTA
ACTATGGGTC GTTATGAGCA CGAGAACTCA ACCGTCATGC CAGATGGAAA AACCGTGTAT
CTTTCACAGG ATGATACCGG CGGCGTGTTA TTTAAGTTCA TTGCTGACAC CGCTGAAGAC
CTCTCTACTG GTACCCTTTA CGGCGCTAAA TTAACCCAAG ACCTTGGCCA AAATGAACCT
GCTACTACCG GTTTTGATGT TCAGTGGGTT GAACTTGCCA GTGGTGATAA TGCCACTATT
CGTGCATGGG TGAATGAATA CAACGACATT GGCACCGATG ACTACATAGA AGGCCAGAGT
TCATACATCA CCATGGCTGA TGTAGCCGCT TGGGCAAATG GCGATGCGAC CTACCCTACC
GTTGAAAATG GCGGAAGCAG CCAAACAGCA GGGGAGCCAA TGGATGATCG TGTGGCGTTT
CTTGAATCAC GTGCAGCTGC GCGTGCTAAA GGTGCAACAG CTGAATGGCG CAAGCTTGAA
GGTATTTCAA TCAACCTAAA GCGCGCTGAA GAAGCGGTTG AAGGAACAGA TACCATAGAC
GGTGAAGTGG TTGAAAATGC TTATCTTTAC ATCGGTATCG CGGATTTAGA TAACACCATG
GTGGATGACG AAGGTGATAT TCAGCTTTCA GCACGTGTTA AAGATTGTGG TGGTGTGTAT
CGCGCTCGTC TTGAACAGGG GTATGACATT ACACGTATCG AGCCTGTAGT GATGGGGGGA
ACTTACCGCT CAAGCTTAAC AGGAGCAGAG CGTTGTGATG TGGAGCAACT TTCTCAGCCA
GATAACGTTG TGGTGATGAA CGACGGCCGT ATTCTGATTG GTGAAGACGG ATTCCAGGAA
AACAACACGC TGTGGATGTA CGAGCCAGCA GACAAGTAA
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| Protein sequence | MKIQNLRDIK YSALALAVAF GISACSLDGD DGEDGAQGAV GEQGEQGAQG EQGDTAGKLT
RIATVPLGAE VTGIFLTDEG DLFFNVQHPS GTNAVTTEVN AKPINTGTVG VLAGANFNNL
PVTLPNSPVP ASDEEKEVVV SAIGQYQVLG QTGDTFGTEL PEGLGHIYTL DGEELVLEND
MPDFNGFIST ASGEGYLFSN WEELPGGMSR MKIERDDFGM WQVTEAMMLD FSPVWGTAAN
CFGSMSPWNT PLTSEEWVVD SSVDSTTSPS WNDPEAVATD ARLGRMWQMT APDASNPYNY
GYIAEVTEPL ADEPVIVKHL TMGRYEHENS TVMPDGKTVY LSQDDTGGVL FKFIADTAED
LSTGTLYGAK LTQDLGQNEP ATTGFDVQWV ELASGDNATI RAWVNEYNDI GTDDYIEGQS
SYITMADVAA WANGDATYPT VENGGSSQTA GEPMDDRVAF LESRAAARAK GATAEWRKLE
GISINLKRAE EAVEGTDTID GEVVENAYLY IGIADLDNTM VDDEGDIQLS ARVKDCGGVY
RARLEQGYDI TRIEPVVMGG TYRSSLTGAE RCDVEQLSQP DNVVVMNDGR ILIGEDGFQE
NNTLWMYEPA DK
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