| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1464 |
|---|
| Symbol | |
|---|
| ID | 4172190 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | + |
|---|
| Start bp | 1758500 |
|---|
| End bp | 1759486 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 638054474 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_661041 |
|---|
| Protein GI | 109897786 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4757] Predicted alpha/beta hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAATT CAACGCAATC GGCTATTGCA TCGTCTACGC AATCTTTAGC AGGTGTTGCA
ATATCTAGTG ATATAGCGGC CGAATTGAAT AGCAGAAACG AGTCTTCCAT CACGGATGAA
GCTTCATCTA GCGGGTTAAG CATTGAGCAT GACATCGTTA CAGATGCTGG TCATTCGGTG
GTGCTAAAGG TTTTTAAGAG TCAGCTAAAA CCTGTAAAAG GCATTTGCGT GGTTGCGGCC
GCGACGGGCG TAGCGCAGCA TCTCTACCAG GATTTCGCGA TATGGCTAAC CAGCTTAGGC
TTTCATGTTG TGACATTTGA TTATGATGGC ATTGGTTCGT CTATGGATCG CCATGTAAAG
CATTGCAATA GTGACTTGTT AGGGTGGGCG AATAATGATT GTCCCGCAGT ACTTAATTTT
GTTGAGAGGC ACTTCAGCGG TCTCGAGTGT ATTTGGATTG GTCACAGTGT AGGCGGTCAC
ATGCTGGGCA TGATGCCTAA TACTGGCCCG ATCAGCCGGG CGATTACAGT TGGTACTGGC
ACAGGAACGT GGTGGTACAA TTCGCCCCCC ACTAAGCGTG TTGCGTGGTT TTTGTGGTAT
TTTCTAGTGC CACTGACAGT GCCGACTTTG GGCTACTTCC CTGGGGATAA GCTAAACATC
ATGTGCAACC TGCCCAAGGG CGTGATGATG CAATGGCGAC GTTGGTGCCT TAAAGAGGGG
TATGCAGTTG AGAACGAAGG GCAGTGGCTT AAGGAGCGCT TCGCCAATGT GAGCTTACCT
ATTTGCGCAA TTGCGTTCAG TGATGATGAA ATGATGTCTT TGAAGAATAT CGATATGTTG
CATGATCAGT TCAGCACTGC AAATATAACC CGACACACTG TCGCGCCTAA AGATGTTGAT
CACAAAAGAA TAGGGCATAT TGGTTGGCAT AAGGGACGTT ACCAAAATAT GTGGGAAAAG
GTATTCAGGC CTTTGTTACT GAGTTAA
|
|---|
| Protein sequence | MNNSTQSAIA SSTQSLAGVA ISSDIAAELN SRNESSITDE ASSSGLSIEH DIVTDAGHSV
VLKVFKSQLK PVKGICVVAA ATGVAQHLYQ DFAIWLTSLG FHVVTFDYDG IGSSMDRHVK
HCNSDLLGWA NNDCPAVLNF VERHFSGLEC IWIGHSVGGH MLGMMPNTGP ISRAITVGTG
TGTWWYNSPP TKRVAWFLWY FLVPLTVPTL GYFPGDKLNI MCNLPKGVMM QWRRWCLKEG
YAVENEGQWL KERFANVSLP ICAIAFSDDE MMSLKNIDML HDQFSTANIT RHTVAPKDVD
HKRIGHIGWH KGRYQNMWEK VFRPLLLS
|
|---|
| |