Gene Patl_1330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1330 
Symbol 
ID4172794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp1595622 
End bp1596044 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content38% 
IMG OID638054337 
Producthypothetical protein 
Protein accessionYP_660910 
Protein GI109897655 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.522262 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGTAG TAACGCTTTT TGTCAATTTT TATAAATCAC TAGACACCCA ATCACTCAGT 
GAGCTTAAAA ACATATACAG CGATGATGTA GTGTTCGTTG ACCCTGTCAC TGAACATAAG
GGTTTTGCTG CTGTTCATCG TTATTTCGAG CAATTATTAG CAGATGTCAA TGAGTGTACC
TTTGATATTT CACAGATAAA AGAAGCTGAC TCAACTGTGT TTGTGAACTG GAAAATGTAT
TTTAGACACC CTAAATTAAA GGCAGGTAAG CTTATTAGCG TTGAAGGCAT CAGCCAGCTG
ATAGTGAAGA AACAAAAAAT TTGCTACCAG CGAGATTATT ACGATTTGGG CAGTATGCTC
TACGAACAAG TGCCGCTGTT AGGCACAGTG ATTAAATATC TTAAAAAGCG ACTCGCATCA
TGA
 
Protein sequence
MEVVTLFVNF YKSLDTQSLS ELKNIYSDDV VFVDPVTEHK GFAAVHRYFE QLLADVNECT 
FDISQIKEAD STVFVNWKMY FRHPKLKAGK LISVEGISQL IVKKQKICYQ RDYYDLGSML
YEQVPLLGTV IKYLKKRLAS