Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1330 |
Symbol | |
ID | 4172794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 1595622 |
End bp | 1596044 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638054337 |
Product | hypothetical protein |
Protein accession | YP_660910 |
Protein GI | 109897655 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.522262 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAGTAG TAACGCTTTT TGTCAATTTT TATAAATCAC TAGACACCCA ATCACTCAGT GAGCTTAAAA ACATATACAG CGATGATGTA GTGTTCGTTG ACCCTGTCAC TGAACATAAG GGTTTTGCTG CTGTTCATCG TTATTTCGAG CAATTATTAG CAGATGTCAA TGAGTGTACC TTTGATATTT CACAGATAAA AGAAGCTGAC TCAACTGTGT TTGTGAACTG GAAAATGTAT TTTAGACACC CTAAATTAAA GGCAGGTAAG CTTATTAGCG TTGAAGGCAT CAGCCAGCTG ATAGTGAAGA AACAAAAAAT TTGCTACCAG CGAGATTATT ACGATTTGGG CAGTATGCTC TACGAACAAG TGCCGCTGTT AGGCACAGTG ATTAAATATC TTAAAAAGCG ACTCGCATCA TGA
|
Protein sequence | MEVVTLFVNF YKSLDTQSLS ELKNIYSDDV VFVDPVTEHK GFAAVHRYFE QLLADVNECT FDISQIKEAD STVFVNWKMY FRHPKLKAGK LISVEGISQL IVKKQKICYQ RDYYDLGSML YEQVPLLGTV IKYLKKRLAS
|
| |