Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1328 |
Symbol | |
ID | 4172792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 1593621 |
End bp | 1594892 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638054335 |
Product | hypothetical protein |
Protein accession | YP_660908 |
Protein GI | 109897653 |
COG category | [R] General function prediction only |
COG ID | [COG2907] Predicted NAD/FAD-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTAAAC GAATTGCCAT TATCGGCAGC GGTATTTCAG GTTTGACCTG CGGCTACTTA TTAAATAAAA ATCACGATAT CACCGTGTTT GAAGCCAACG ATTATATTGG CGGTCACACG GCCACCAAGG ATGTCACCGT TAATGGCCGA GAATATGCTA TCGATACCGG CTTTATTGTA TATAACGATT GGACCTATCC GAATTTCATC AAGTTGATGG ATTCACTCAA TGTAAAAAGC CAACCCACCG AGATGAGTTT CAGTGTCAAA AATCCAGCGC AGAATCTTGA GTATAACGGC AATACCATCA ACAGCTTGTT TGCCCAACGA CGCAACATTT TCCGCCCGTT CTTTTGGCGT ATAGTAAGTG ATATTTTGCG CTTCAATAAA TTATGTAAAG CACAAGATTT GGATGGCATC TCCGCTGACC AGAGCCTGTT TGGTTTTTTG ACGGAACAGC ATTTTAGCGA CGCGTTTATT TATAATTACA TATTGCCCAT GTGCGCTGCG ATTTGGTCCA CTAGTGTCGA AGATATAAAA GCATTTCCAT TCAAGTTTTT TCTACGATTT TTCAATAATC ATGGCCTATT GAATGTGACG GATCGCCCTC AATGGCATAC GTTAATCGGC GGCTCAAGAG AGTATATTGG TCCCCTGACC AGAGGCTTCA CAAATAAAAT ATTATTGAAT ACCCCCGTCA CGTCTGTGAC CAAAACAGCG CAAGGCTATG AGCTGACCAG CTCTAAAGGC AGTGAATACT TTGATGATGT TATTTTTGCT TGCCACAGTG ATCAGGCGCT TCGCCTATTA GACAATACCA GTATTGTGCA GCATGCTTCG GTGAAGAGCA TTTTAGGCGC CATAAAGTAC ATGCCCAATG AGGTCATATT GCATACTGAT GAAAGCGTTT TGCCCAAACG TAAACTGGCA TGGGCCAGTT GGAATTACGC CATAGCCGAT GAAAAACACG CTCATCAATC CCCCGCCGTG CTGACCTACA ATATGAATAT ACTGCAATGT TTGCGTACTG ATACGACATT TTGTGTGACG TTGAACGACC GAGCCTCAAT CGCAGATGAC AAAATACTAG GCGTGTACCA ATACGCTCAC CCCCAATTCG ATAATGCAGC AATAGCCGCT CAATCCAGAC GCAAGGAAAT ATCAGGTGTT GACGGCCTAC ATTTCTGTGG CGCCTACTGG TATAACGGCT TTCATGAAGA TGGCGTGCTG AGTGCGTTAG ACGTATGCCA GCACTTTGGT GAAAGTCTGT AA
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Protein sequence | MSKRIAIIGS GISGLTCGYL LNKNHDITVF EANDYIGGHT ATKDVTVNGR EYAIDTGFIV YNDWTYPNFI KLMDSLNVKS QPTEMSFSVK NPAQNLEYNG NTINSLFAQR RNIFRPFFWR IVSDILRFNK LCKAQDLDGI SADQSLFGFL TEQHFSDAFI YNYILPMCAA IWSTSVEDIK AFPFKFFLRF FNNHGLLNVT DRPQWHTLIG GSREYIGPLT RGFTNKILLN TPVTSVTKTA QGYELTSSKG SEYFDDVIFA CHSDQALRLL DNTSIVQHAS VKSILGAIKY MPNEVILHTD ESVLPKRKLA WASWNYAIAD EKHAHQSPAV LTYNMNILQC LRTDTTFCVT LNDRASIADD KILGVYQYAH PQFDNAAIAA QSRRKEISGV DGLHFCGAYW YNGFHEDGVL SALDVCQHFG ESL
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