| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1272 |
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| Symbol | |
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| ID | 4173283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1527170 |
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| End bp | 1528222 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638054279 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_660852 |
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| Protein GI | 109897597 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3449] DNA gyrase inhibitor |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.702716 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATTGG TGTTCATGGA CAGCTTGCAT AGCATTAAGC GACCACAAGG TAGCAAGGTT
AAAATTGAAA ACGTTCTAAC GTATATCAAT GAGCATATTG ACCACCCGCT GCTTGCAACG
GATTTGGCCG ATGTTGCGTG TTTTTCCGTT TTTCATTTTC AACGCGCTTT TACTCTGTAC
ACAGGATATA ACGTTGCCGA ATATGTGTTA TTAACGCGGT TACGTAAAGC CGTATATGAG
TTGCGGTATC GCCCTTCAAT GTCTGTGCTT GATATTGCGC TTAGCTGCGG GTTTAGTCAT
CATCAGAGCT TTACCCGTGC ATTTAAGCGT CAGTTTTGTC AAGCCCCTTC GATATTTCGA
AAGCAATTTG TTGAGTATGT TAGAAAGTCT CATGCAATTC CCACTCATCA AGCTATTGTG
GGCGCGCCAG CCAATGTTAG CTATTTCGAA GAGCTCACCC CAACGACTCA TTCATCCTGT
ATAAAAATGC TCACCGTGAA CGAAAATAAT GGTAAACACG CCAACAAAAA AGAAATAAAG
ATACGAGGTG CTTACATGAC TGACATAAGC AGTAAGAACA TTCCACTACA GCAGATACAG
GTTATTGATT TTCCTCGGAC GGCGATCGCA TTTTTAACTC ATGAGGGCGA CCCTGAAGGT
GTCATGAAAA CCGTTGCACA ATTTATTCAA TGGCGAAAGC AGTACGGACC TTCACCTCGC
ACTAGCAAGA CATACAACAT TTTATACAAT GACCCTAGAG ATGTTCCCAA GGAGGAATAT
CGTTTTGATG TTGCAGCTTC CATAAGGAAG GTCGTTGAAC CGAATGATTA TGCTGTACAG
CAGGGCGTTA TCGGCAGCGG GCGATGTGCC CATTTTCGAC ATAATGGCAG TGATAGGCTA
TTAAGCGAGA GTATCGATGA GTTGTATAAA ACGATATCCC TAAATGAGGA TTATGAGATA
AGAAATGCAC CTCTATTTGT GGAGCGAGTC CAAGGGTTCC CCGACGTACC TGAAAATGAG
ACCATCATAG ATATTTATTT GCCAATTGTT TAA
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| Protein sequence | MALVFMDSLH SIKRPQGSKV KIENVLTYIN EHIDHPLLAT DLADVACFSV FHFQRAFTLY
TGYNVAEYVL LTRLRKAVYE LRYRPSMSVL DIALSCGFSH HQSFTRAFKR QFCQAPSIFR
KQFVEYVRKS HAIPTHQAIV GAPANVSYFE ELTPTTHSSC IKMLTVNENN GKHANKKEIK
IRGAYMTDIS SKNIPLQQIQ VIDFPRTAIA FLTHEGDPEG VMKTVAQFIQ WRKQYGPSPR
TSKTYNILYN DPRDVPKEEY RFDVAASIRK VVEPNDYAVQ QGVIGSGRCA HFRHNGSDRL
LSESIDELYK TISLNEDYEI RNAPLFVERV QGFPDVPENE TIIDIYLPIV
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