Gene Patl_1217 details

Gene Information

• Locus tag: Patl_1217
• ID: 4172683
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: -
• Start bp: 1469091
• End bp: 1469789
• Gene Length: 699 bp
• Protein Length: 232 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 638054224
• Product: hypothetical protein
• Protein accession: YP_660797
• Protein GI: 109897542

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTAATC AAGTCCCCAA AAAACAAAAT GGATTTTTCG GAAATCTAGC ATTTAATATC 
ATTATCCCTG TGGTGATCAT GAGCAATTTA AGCTCTGATG AATACCTAGG CCCAGCATGG 
AGTATTGTTG CCGCACTGAT ATTCCCTATC GGTTATGGGT TGTGGGATCT TAAAGAGTCC 
GGCAAGGTAA ATGCCTTTTC AATATTGGGG ATTGTCAGCG TTATATTAAC CGGTGGCATT 
AGTCTGTTGG AACTTCCTGC TGATTATATT GCTATAAAAG AAGCGGCTAT TCCGGCTGTA 
ATTGGCATTG CCGTGTTAAT TACCCAGCGC ACTACCAAGC CATTACTAAA GGTACTTGTG 
CTCAACGAGC AAATTGTCAA CTGGGACAGT TTGAGCCGAG CATTAGAAGC AAAAGGTACC 
ACTAATGACT TTGAAGGCAA GATGGCGATC AGCTCTTATA TTGTCGCTGG TTCATTCTTT 
TTATCTTCAG TTTTAAATTA CGTTTTGGCC AAAGTGATTC TGGTAAGCCC CCCAGGGACG 
ACCGAATATA CAGAAGAGCT TGGTCGCATG ACCGCACTGA GCTACCCAGT GATAGTGATA 
CCGAGCATGA TCATGTTAAT GGGCGCCTTG TGGTACCTAT TCGCTCAAAT TAAGAAATTA 
ACGGGTGAAG ATTTAGAGAA TTTCCTTGCC CAGCAGTAA 

 

Protein sequence

MSNQVPKKQN GFFGNLAFNI IIPVVIMSNL SSDEYLGPAW SIVAALIFPI GYGLWDLKES 
GKVNAFSILG IVSVILTGGI SLLELPADYI AIKEAAIPAV IGIAVLITQR TTKPLLKVLV 
LNEQIVNWDS LSRALEAKGT TNDFEGKMAI SSYIVAGSFF LSSVLNYVLA KVILVSPPGT 
TEYTEELGRM TALSYPVIVI PSMIMLMGAL WYLFAQIKKL TGEDLENFLA QQ