Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1191 |
Symbol | |
ID | 4172597 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 1436158 |
End bp | 1437312 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638054198 |
Product | glycosyl transferase, group 1 |
Protein accession | YP_660771 |
Protein GI | 109897516 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA CCTTGCTATT GAGTGAAATA TTTCCCCCCG TTAAAGGTGG AAGTGGCCGT TGGTTTTGGG AGGTCTATAC GCGCATAACA ACAGGTAATG TCGTTGTAGC CGCTGGACAA GATGATAAAA GTGATGAAGT TGATAGCATA AGCCCACTTG AAACGTATCG TTTACCACTT AGCTCATGGA GCTGGGGCTT AAAGAGCCTA ACGGGGCTAA AATACTACTT TCGCGCATTA CGTGCCGTAT TAAAAGTCGT CAAGCAAAAT GACATTGAGG TCATTCACTG CGGACGTTGT TTACCCGAGG GCTTTATTGG TTTTCTCATC AGTAAAATAA AGGGTATTCC GTATATTTGC TATGTTCACG GTGAGGATGT GGAAACAGCA GCGACCAGCC GAGAACTAAG TTGGATCGTT AATAAAGCGC TCGGTGGCGC GACTCGACTT ATCGCCAATA GCCAGAACAC GGCTGACATA TTACTCAATA AGTGGCATAC CGACCCTGCA AAAACCATGG TATTCAATCC CGGTGTAGAC GCTAGTTTGT TCATCCCCGC CCTCCCCTCA CAAGAGGTAA AATCACAATT TGGCTGGGAA GATAAAAAAG TGGTTCTCAC AGTTGGGCGC CTACAAGAAC GTAAAGGGCA CGACAAACTC ATTGAAGCAT TGCCCATCAT CATAAAACGC TTTCCTACTG CCTTGTACGC GATAATAGGC GATGGCGAAC GCAAGAGCGC CTTACATGCC CTTGTAAAAG ACCTGAACCT TGAAGAGCAC GTCTTATTCA TGTCTGAGCT GAATGATGAA CAAATGATCC AGTGCTACCA GCAATGTGAT GTATTTGTTC TGCCAAATCG CACCGTAGGA AGCGATATCG AAGGCTTCGG TATGGTGCTA GTAGAGGCGC AAGCATGTGA ACGCCCTGTC ATTGCTGGGG ATTCAGGAGG CACATCTGAA ACCATGTTAC TAGGTGAAAC GGGTTTTATC GTTGATTGCA CCCAGCCCCA AGTGTTAGCT GACAAGATAT GCGACTTACT CGAAAACGAT ATCCTCAGAG AAAGAATGGG CAAAACAGGT AGAAAGCACG TTCAACAGAC CTTGGACTGG CCAGTGCTGA GTGAAAAGAT AGTGACAGAG TTCAATAAAT TGTGA
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Protein sequence | MKKTLLLSEI FPPVKGGSGR WFWEVYTRIT TGNVVVAAGQ DDKSDEVDSI SPLETYRLPL SSWSWGLKSL TGLKYYFRAL RAVLKVVKQN DIEVIHCGRC LPEGFIGFLI SKIKGIPYIC YVHGEDVETA ATSRELSWIV NKALGGATRL IANSQNTADI LLNKWHTDPA KTMVFNPGVD ASLFIPALPS QEVKSQFGWE DKKVVLTVGR LQERKGHDKL IEALPIIIKR FPTALYAIIG DGERKSALHA LVKDLNLEEH VLFMSELNDE QMIQCYQQCD VFVLPNRTVG SDIEGFGMVL VEAQACERPV IAGDSGGTSE TMLLGETGFI VDCTQPQVLA DKICDLLEND ILRERMGKTG RKHVQQTLDW PVLSEKIVTE FNKL
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