| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1179 |
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| Symbol | |
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| ID | 4172585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1421533 |
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| End bp | 1422459 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638054186 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_660759 |
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| Protein GI | 109897504 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGATT TTTCTGTCGC AATACACTCA TACAATAGAG AAGAATATAT TGTTGAAACA
GTTGAAAGCG TTTTAAATCA AACATTAGCA CCGAAAGAAG TCATCGTGAT AGACGATGGT
TCATCTGACA ATACAGAGGC TGTACTAGAA CCATATTTAG ATCGGATTGT GTATAAAAAA
ATAGCGAATG TAGGATGCGG TACATCGCGT AAAGTAGCGG TTGAGTGCTG TCAGAATAAG
TGGATTGCAT GCAATGACGA CGATGATATT TGGTTACCAA CGCATTTAGA ATCGTTATCA
AATACGATTA AGTCATTTCC GAAAGTAGAA TACGTTTTTT CCAATCACAC GCAATTTGAT
GACAGAGCAA TAGCAAATTA CGATCATTTT TCTACAGCGC CCTCTGGATG GTGGGAAAGT
GTTTCCGCAA GTGTTGATAT GGATAAGATA TTGCTAGCGG AAGATGCATT TTTAGACTTT
CTAACATTTA ACCCTTCTTT CCCATCGACT TGGGCGTTTA CTAAACAAGC CTATATCAAG
GCTGGAGGAA TAGATGATAA ATACAGTCGA ATGAATTCAG AGGATTCTGA TTTTACAAGG
CGTATATTAC TTGTAGCGCA AGGAGCATGC ACAAATCAGA AGACGGTTAA ATTGCGTCGT
CACGGAAAAA ACATGTCTGA TGATTTTGTT GCTAACTTGA AAGGCAAGGC TCTGATTCTT
GAGGATATAG TGGCAAAAGG CATTGTACCC GATAGGTATC TATCGCGGAC AGTTGCAGCT
ATTAACAAAT CTAAAATCCA AGCATTCAGA CACCTCTATT GGCAAGGACA GTATCGAGAG
TCTGTTAGCT ATGCCAAGGA AAGCAATACC AAACTTTCAA TCAAAGATAG ACTCAGAATG
ATGAATGCGC GGTTTCAGAA GTCTTAG
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| Protein sequence | MIDFSVAIHS YNREEYIVET VESVLNQTLA PKEVIVIDDG SSDNTEAVLE PYLDRIVYKK
IANVGCGTSR KVAVECCQNK WIACNDDDDI WLPTHLESLS NTIKSFPKVE YVFSNHTQFD
DRAIANYDHF STAPSGWWES VSASVDMDKI LLAEDAFLDF LTFNPSFPST WAFTKQAYIK
AGGIDDKYSR MNSEDSDFTR RILLVAQGAC TNQKTVKLRR HGKNMSDDFV ANLKGKALIL
EDIVAKGIVP DRYLSRTVAA INKSKIQAFR HLYWQGQYRE SVSYAKESNT KLSIKDRLRM
MNARFQKS
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