| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1150 |
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| Symbol | |
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| ID | 4173201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1391736 |
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| End bp | 1392875 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638054157 |
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| Product | signal transduction histidine kinase, LytS |
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| Protein accession | YP_660730 |
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| Protein GI | 109897475 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3275] Putative regulator of cell autolysis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGTTTTC GCAAATCCCT TGGCGAAATA GGGGAAGCAA AACCTAGTTT CTGGACATTG
CACTTATTTG GCTGGTCGTT TTATGTGCTG ATTTTTACCA TTGAGTATGC AGCATTCAAT
CCTTATGCGG CGAATGCTAA CTACTTAATC GTAATGCCTC TGTTGTTTTC AGGATTAGTT
GGTGGGCTCC TGACATGGCC GCTGCGTTAT ATTTATGGGC ATTTATCAAA GGGTGCACCA
CTGCAAGTAT TGTTAGTGAT TATTACTGTT TGCATGCTGA TTGCCGTAAT TTGGACGCCC
ATCAAAAACT TACTGCTGAT GTACTTTTTC GATCACGTAA CCTTGTACGA CTTGTATTTA
GGCAATCAGC CCGAAGGTTT TCATGTAGGG GAGTTGTTTT TAACCGTTAC CTATTCGTTT
TTTATGATTA TGGTATGGAG TTGTTTGTAC TTTGGGATTA ATTATCATTT CAAGTTATTA
CATGAAAAAC AGCTGCATTT AGAAGCTATC CGCTTGTCTC ATGTGGCCCA AATTAAAATG
TTGCGCTATC AAATTAATCC GCATTTTCTA TTTAATACAT TGAATGCTAT TTCGACGTTG
GTTTTGCGCG GTGATAAAAG TACTGCGAAT AAAATGCTAG TCGGCTTAGC GACCTTTTTA
CGCTTTTCAC TGGATAACGA CCCTGAGCAG AAAATCCGTT TGCGTGACGA GATAAAAGCT
TTGATGCTTT ATTTGGATAT TGAGAAAAAG CGCTTTGCTG AGAGACTCAA TGTTCATTTT
GATATTGAAG CGGCCACTAA TAATCTACTG GTACCCGGCT TGTTATTACA GCCATTAGTA
GAGAACGCGA TTAAGTATGC TATTGCGCAG ATGGAAACCG GAGGGATTAT TGAAATCAAT
GCTAGAATCC ACAACAACTT GTTACATCTT ACGGTTGCAG TTAACGGTCC TAATTCACAT
AGTATCCCCT CATCAACGGC GCAATTGCGC GAAGAAGGCC AACGAGGCGG AGTCGGTTTG
AAAAACGTAA TGGAACGTTT GCAGGTACTT TATGCCGAGA ATCATCAATT TTCTATTCAA
AAAAGCCCGC ATTCAGGTTG CGCTGTAAAT ATTGTGTTGC CTGTGGAACT GCGCGCTTGA
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| Protein sequence | MSFRKSLGEI GEAKPSFWTL HLFGWSFYVL IFTIEYAAFN PYAANANYLI VMPLLFSGLV
GGLLTWPLRY IYGHLSKGAP LQVLLVIITV CMLIAVIWTP IKNLLLMYFF DHVTLYDLYL
GNQPEGFHVG ELFLTVTYSF FMIMVWSCLY FGINYHFKLL HEKQLHLEAI RLSHVAQIKM
LRYQINPHFL FNTLNAISTL VLRGDKSTAN KMLVGLATFL RFSLDNDPEQ KIRLRDEIKA
LMLYLDIEKK RFAERLNVHF DIEAATNNLL VPGLLLQPLV ENAIKYAIAQ METGGIIEIN
ARIHNNLLHL TVAVNGPNSH SIPSSTAQLR EEGQRGGVGL KNVMERLQVL YAENHQFSIQ
KSPHSGCAVN IVLPVELRA
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