| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1140 |
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| Symbol | |
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| ID | 4173189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1378183 |
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| End bp | 1379205 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638054146 |
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| Product | transport system permease protein |
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| Protein accession | YP_660720 |
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| Protein GI | 109897465 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAACC GCTGGTCGTT GCTATTTGTA CTTGCGGTAC TCTCGCCCAT TATCGGCATA
TTTTTTGGTG CTGCAGACTT GCCTGCATCT GAACTGTATC ACTGCATAGT TGACCAGTGT
AGCACTGACG TTAACGCGCT AATATTTTGG GAGATTCGCT TACCTAGAGT GCTCGTGGGC
TTTTTAGTTG GCGCAGGCCT TGCTGTTGCC GGGGCCACAT TGCAAAACAT TACCCGCAAC
GGATTGGCTG ATCCTTACCT ATTCGGTGTG GTATCTGGCG CAGGGCTCGG AGCGAGTATC
GCAACACTGT TGTTTGACAG TCAAATAGGC GAAACCTTAA CGATATTCGG TATGTTGCCT
GATGTGCCTT TTTCAATCGC ACTGCCGGTC GCCGCCTTTT TAGGCGCAGT ATTTGCCGTT
ACCTTAGTCC AAGCGCTGGC CGCAACATCT TTTGGAGGGC GCGGCGAGCA CATGCTGTTA
GCCGGTGTGG CGGTGTCATT TATGCTCAGT GCTCTGAGTC ACTTTTTACT GTTTTTAGGC
GACCCTTTCG CTGCAAACAA AGTTATTTTC TGGTTAATGG GCAGTCTTGC TCGCACTGAA
ATGTGGTACG CCTGGATCAT GCTACCCGTG GTTATGGGCA GCGTGGTACT GCTGTTACTT
TTCGGTCGGC GCTTAGATGC CCTCTTGCTA GGCGACGAAA ATGCCAAAAC CCTAGGCATT
AACGTCACCG CTCTTCGCTT AATGGCTTTA GGTATTTGCG CTGCACTAAC CGCGTGCATT
GTGGCTTACT GCGGCGGCAT TGGGTTCGTT GGCTTACTTA TCCCCCATAT TGTGCGACGC
TGGGTTGGGG TGACGAGCCG CGCTTTAATT TTAGGCTGTG TACTCATCGG CGGCAGTTTT
ATGGTGCTAG TTGATATCGT TGCCCGCTCG GCCCTTTCAG ACCAAGAAAT CCCTATCGGC
ATTATCACTT CAGCCATCGG CAGCGTGTTT TTCTTACTCG CTATTCGTCA GCGACAGGCA
TGA
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| Protein sequence | MTNRWSLLFV LAVLSPIIGI FFGAADLPAS ELYHCIVDQC STDVNALIFW EIRLPRVLVG
FLVGAGLAVA GATLQNITRN GLADPYLFGV VSGAGLGASI ATLLFDSQIG ETLTIFGMLP
DVPFSIALPV AAFLGAVFAV TLVQALAATS FGGRGEHMLL AGVAVSFMLS ALSHFLLFLG
DPFAANKVIF WLMGSLARTE MWYAWIMLPV VMGSVVLLLL FGRRLDALLL GDENAKTLGI
NVTALRLMAL GICAALTACI VAYCGGIGFV GLLIPHIVRR WVGVTSRALI LGCVLIGGSF
MVLVDIVARS ALSDQEIPIG IITSAIGSVF FLLAIRQRQA
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