Gene Patl_1132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1132 
Symbol 
ID4173181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp1370550 
End bp1371275 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content50% 
IMG OID638054138 
Productphosphoglycerate mutase 
Protein accessionYP_660712 
Protein GI109897457 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCTCTA TTACCGCTGC TCACCCTGAT ACGGTCCATT TTTACCTTTG CCGTCATGGG 
CAGAGTGAAT TTAACGCCAA GGGGTTATTA CAAGGGCACT TAGACAGCCC GTTAACCGCA
AAGGGAATAG CGCAAGCACG AGCCTTGGCG TTGAAAGCCA AGCATTGGAA AATCAACCAT
ATCGTTAGTT CGCATCTTGG CCGCGCTCAG CAAACGGCGG ACATTTGCGC CCAAGCACTT
AACAATGGCG CACAAGGCTC ATTGCGCCTC GAGCCACAAA ACTTTGCAGA TTTAGCAGAA
CGCCATTTAG GCGATTGGCA AGGCAAACCC ATAAAGCAAT TACCGGAATT CCATGCATTT
AATCAGCTGT GCTACCAACA AACGCACATC ACTCCGCCGA ACAGCCTAGA GCCAGATAAT
AGCCTTGAGC CAGAAAACAG CCTTGAGCGA ACGGACAGCC GTGACCTTAA TAACAACCTA
AAGCAGAGTG AAAGCACAGC CACGGTTCGC GAGCGAATGC AAAAAGCGCT CGTCTGTATC
GCGTATTCCA AAGCACTAAA CAGCAAGCCA TCACAAGCGC AACACAATGT GCTCGTTATC
AGCCATGGCG ACGCTATTGC CTGCTTAATG AGCTTATTTA GGCCGCCTAT GTTGCTCCCA
AACACCCAAG GCATATTGCT TAGCTATCAA AATGACACGC TGGAATGGGG CGGCTTGCTT
GACTGA
 
Protein sequence
MISITAAHPD TVHFYLCRHG QSEFNAKGLL QGHLDSPLTA KGIAQARALA LKAKHWKINH 
IVSSHLGRAQ QTADICAQAL NNGAQGSLRL EPQNFADLAE RHLGDWQGKP IKQLPEFHAF
NQLCYQQTHI TPPNSLEPDN SLEPENSLER TDSRDLNNNL KQSESTATVR ERMQKALVCI
AYSKALNSKP SQAQHNVLVI SHGDAIACLM SLFRPPMLLP NTQGILLSYQ NDTLEWGGLL
D