Gene Patl_1122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1122 
Symbol 
ID4172297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp1359562 
End bp1360017 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content45% 
IMG OID638054128 
ProductMarR family transcriptional regulator 
Protein accessionYP_660702 
Protein GI109897447 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCAAAG ACGACGACAT ATTATTAGAT TTAAATCAGT TTTTTCCGTA TCAGCTGTCG 
ATATTGGCGC AGCAAGTCAC TGAATTTATA GCTAAAATAT ATGAAAAACA CGGCTTAACG
AGAACCGACT GGCGCGTGCT CGCTGCGGTT GGCTTTCATG GTGAAATATC CGCTCGAGAC
ATATGCAAGT TCACACGATT AGAAAAGATG CCAGTGAGTC GTGCTATTGC AAAACTGATT
CGAGCAGGCT TATTGCTACA ACATCCGGGC TCCTTGGACC GGCGCACAAA TGTGCTTAAT
CTAACGTCTG AGGGAGCGAA GGTGCATCAA CACATTATTC CTTTGGTGAA GGCCCAGGAA
GAACGTTTAC TCGAGGGATT ATCTACACAA GAGCGAGAAC AATTGAAAGC GCTAACAGTC
AAGCTAGGCC AACAATTAGA AGTGGCCACT AAATAA
 
Protein sequence
MPKDDDILLD LNQFFPYQLS ILAQQVTEFI AKIYEKHGLT RTDWRVLAAV GFHGEISARD 
ICKFTRLEKM PVSRAIAKLI RAGLLLQHPG SLDRRTNVLN LTSEGAKVHQ HIIPLVKAQE
ERLLEGLSTQ EREQLKALTV KLGQQLEVAT K