| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1121 |
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| Symbol | |
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| ID | 4172296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1358477 |
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| End bp | 1359487 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638054127 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_660701 |
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| Protein GI | 109897446 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACTTAA AATATTCACG CACGGGCATA GAATTTAAGC ATTTGCGCAC GGTAGTTGCG
GTTGCGGAAG CGGGCAGTAT TACTAAAGCT GCTAAGTTGC TTTATACGGC GCAACCTGCG
TTAAGCACGC AGTTACAGCA GCTAGAACAC ATTTTGGGGG CTGATTTATT TGTCCGAACA
CCAAAAGGAA TGCAGGTCAC TGAGGCCGGT GAACAGTTTT TGGTGCATGC AAAATCTATT
CTTAAGTATT TTTCACATGC GGTGGCAGAA CTCAAATCGA GTTCAAAGCA CGTGTCAGGC
TCGTTTACCA TAGGTTGTGC TAATAGCCTT GCCAACTCCA TTGGGGCGAA TTTGATGATG
AGTTTAAAGC ATCGATTTCC CAAGCTAATA CCATCCATTC AAGCTTTAGG TGGCACAGCG
CTACAGCAGT CTGTCGTGGC AGCTGAGCTC GATTTTTATA TTACCAGTTC AGCTATCGAG
TTAAGTACAA GCGATCGCAC TGTAGTGCAT CGTGCTGAGA ACTTGAGCCT CGGCTCTTCT
TTGGTGGAAG AAATTGCCGT TGAGCGGTTC TTAATCTGCT TGCCAAGTGA TGTGGATAGC
GCAACAACCT CCGGCGGCCA AGAACAAGTT ATTTTGCAAG AGTTGCCGGT TGAAATTCTC
GAAACGGCGC CGCTGTGTTT GTTTTCAGAA GATCATGGCA TATCAGGCAT CATTGATTGG
TTAGCACAGA AACACGACCT CAATATTTCC CACTATGGCT ACACCAACAA TACTGAGATC
ATGATTGATC TGGTGCTATC TGGGCAGTGT ATCGTGGTGC TGCCATCATC TTTCGCTGAG
TTGTTTACAC GGCGGCCAAG CTTACGCCTG CATCCATTAC AGGGTTATCG TATAGAGCGT
GATATCGTGC TGTGTTATGC CAATGATTTA GAGGTCTCTG ATACGACTAG ATTAGTAAAA
GAGCTGGTAG GTGAGGTGCT ACGTTCTGCA TTGGTTCACG ATGTTGTGTA G
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| Protein sequence | MDLKYSRTGI EFKHLRTVVA VAEAGSITKA AKLLYTAQPA LSTQLQQLEH ILGADLFVRT
PKGMQVTEAG EQFLVHAKSI LKYFSHAVAE LKSSSKHVSG SFTIGCANSL ANSIGANLMM
SLKHRFPKLI PSIQALGGTA LQQSVVAAEL DFYITSSAIE LSTSDRTVVH RAENLSLGSS
LVEEIAVERF LICLPSDVDS ATTSGGQEQV ILQELPVEIL ETAPLCLFSE DHGISGIIDW
LAQKHDLNIS HYGYTNNTEI MIDLVLSGQC IVVLPSSFAE LFTRRPSLRL HPLQGYRIER
DIVLCYANDL EVSDTTRLVK ELVGEVLRSA LVHDVV
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