| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1112 |
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| Symbol | |
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| ID | 4172287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1342810 |
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| End bp | 1344117 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638054118 |
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| Product | DSBA oxidoreductase |
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| Protein accession | YP_660692 |
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| Protein GI | 109897437 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3917] 2-hydroxychromene-2-carboxylate isomerase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.788647 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAAAAA AACACCTTAT GCGCTATATG ACCAAAGCCA TCTCAAGCGA TGTACTGCTT
AATATTAAGC GCTCTGTCGC AGAAAGTAAG CGAGCAATAA CACTTAGAAA ACATACACTT
GAAATTTTTG TCAGTATAAC TGATCCCTAC AGCTATTTAC TTCTTCAAGT ATTACCTGAA
ATCAAAGTAC GCTATGGCGT TCAAATCAGG CTGTTCACCG TACACGATAA ACAACAAGAG
ATGTTTCCCG ATTTAGAAAA ATGGCAGAGC AATAGTTTAC TTGATTGCAC TAGGCTCGCT
GCTTTATACG AGCTAGAGTT TCCGCCATTA GCATCTTACC GCCCTAAAGC TGAGTTCGAA
CTCGCCCAGT ATTGGGGAGC GATGCTGGAA GCTGAGCATA GCGATACAGC AGTAGAGGAT
ATGCGGGGAA TTTTTCAACA ATACTGGCAA GACATTCCCT GTCCACTCGT TACTAAAAAC
CGGAATGAAA ATATTTCGAT GCCACTAACG CTGTTTAAGA CAATTGCAGA TAATGAGGGG
TATCTTGCCG AACAAGGGCA CTATTTACCT GGCACAATCA AATATGCAGG TGAATGGTAT
TGGGCGATAG ATCGGCTTGT TCACCTTGAA AAGCGTCTAA ACTCATTGCT CTTTGCACCT
AGTTCGCAAG AGATAAAATA CGACCGCCAG ACGAAAATCT CTTTGACTTC CCCGTTGAAG
TTAAAGGCTA TTGCAGATCC AGTCATTCTG TATTTTTCAG CTCGTAGTCC CTATTCCTAT
TTAGGCCTAG AGTTAGCGAT AAAATTGTGC CAACAGTATG CTTGCGAACT GATCGTAAAA
CCTGTGTTAC CCATGATGAT GCGCGGCATG AACGTACCAC AAACCAAGAA GATGTATATT
TTTCATGACA CGAAACGCGA AGCTAAGAAA CAGGGCATCC CTTACGGTTT TGTGGCCGAT
CCCTTGGGCA AAGCCGTTGA AAACTGCTAT TCACTATTTG CTATGGCCAA GGCCCAAGGC
AAAGAGATAA CCTACCTGCT CGAATTCGCT CGCGCCGTGA ACAGCCAAGG CATACTGGCT
GACAACGAAA AAGGTATGCG CATCATCGCA CAGCGCAGTG GCCTTGAGTG GGAAGAGGCG
AAAAAAGAAC TTCGTAGCCA GTCGTGGCGT AAAGACGTTG AAGCCAATAT GGATGAACTT
AACGCATTAG GTTTATGGGG CGTTCCCTGT TTTCGATTTC AGGATACTGT CACTTGGGGT
CAGGATCGCC TCTGGGTCAT CGATCAAGCG ATACAGGCCA ATACCTGA
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| Protein sequence | MLKKHLMRYM TKAISSDVLL NIKRSVAESK RAITLRKHTL EIFVSITDPY SYLLLQVLPE
IKVRYGVQIR LFTVHDKQQE MFPDLEKWQS NSLLDCTRLA ALYELEFPPL ASYRPKAEFE
LAQYWGAMLE AEHSDTAVED MRGIFQQYWQ DIPCPLVTKN RNENISMPLT LFKTIADNEG
YLAEQGHYLP GTIKYAGEWY WAIDRLVHLE KRLNSLLFAP SSQEIKYDRQ TKISLTSPLK
LKAIADPVIL YFSARSPYSY LGLELAIKLC QQYACELIVK PVLPMMMRGM NVPQTKKMYI
FHDTKREAKK QGIPYGFVAD PLGKAVENCY SLFAMAKAQG KEITYLLEFA RAVNSQGILA
DNEKGMRIIA QRSGLEWEEA KKELRSQSWR KDVEANMDEL NALGLWGVPC FRFQDTVTWG
QDRLWVIDQA IQANT
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