Gene Patl_0911 details

Gene Information

• Locus tag: Patl_0911
• ID: 4171965
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: +
• Start bp: 1082683
• End bp: 1084677
• Gene Length: 1995 bp
• Protein Length: 664 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 638053912
• Product: hypothetical protein
• Protein accession: YP_660491
• Protein GI: 109897236

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGACGT TCAAGATTTC AGCCCAAGCC TTTTTACTGC TTGGCTCTTC ATTGATAGTG 
ATGGGATGTG AGTTGCCATC TCGCTCTTCT ACTAACGAAG CTGCGAGTCA ACTACTGGCG 
CAACAATCTA ACCAAGCCCA GACTTTGTTC TCAGAAAACC AAGATGCACT GCCATCCCCT 
AAGCGAGCAA GTAGAAAGTG GGACGGCCCC ATAGTCGGTG ATTTAGACGG TGACGGCTGG 
CAAGATCTTT TGCTGACGGA ACACGCCGAT AAAATCCTTA TTTTTTGGAA TGAGAAGGGT 
AAGTTTAGCC AACCTGACAC GTTACAAACT GGGGATATGC ACGGCACGGG TATTGCTGAT 
TTTGACAACG ACGGCCTACT TGAGGTCATT ATCGCTCAAG GCGGCGGCAA TGGCAGTAAC 
CCAAGAAAGC CTAAACATAT TGAGATAACA AAAGCGCGCC AGCTAACTGA AAACAGAGTG 
TTAAACCACT TTGAAAAAGG GCGAGGGCGG GCGGTGAAAA CGCTGGATGC AAATCAAGAT 
GGCAGTGTCG ACCTCTTCCT GACGGGCTTT GCGACCCCTG AACAAGCGAA AGCTGGTGCA 
AATCACCTGT ATTCAAATGA CGGCACCGGC GCATTTACCT TTGAGGGGAA TTTACCCTAC 
TCACAACGGT TAAGTTATAA AACCATAGTG ACGAACATTA ACGATGATGA TGACCCCGAT 
GTGATTATTT TCGGTGGTGG GAAAATGGTA GCTGCCCTCG GCGGGCCCGA TTTTGAATTC 
ATCGATGCGA CTAAAGCCGT GCTAGGTGAT GCTTACAAGA CGACTGAAGT TAGTGCCATT 
GCTCAGCTTG ATTACGACAA CGATGGGGAT CTTGATTTAG CGATTAGTCG CGCTAAGCAC 
CAATTTAGTC ATCAACTTTT TTATGATAAA GCGCAGCAAC GCTATGCCTT CTTTTCCCGG 
TTTCAGCCAC TGTATATTGA AGAGCTATCC ATTAATGGCA ACTTTCATCT CGTTAATTTG 
CAAATGGCTT ATCCTGATTT TGATATTTAC CTCGGCCAAA ATAAAAGCAA GCTTAATATT 
GCCGGGCGAA AGGACATCAA AAGCTATGAA TCGGATTTAA GTGGCAGTCG GGCGCTGAAT 
ATTGAACCCC AGCAAGCGCT TGGCTGGCCA AGCGATATTT GCCCTGAAGG CGTTAAGATG 
AAGTATTTAT CACCAGAGTC TAAGCCTGGA TTGTATATCG GCTATTTAGG TGACGATAAA 
TGGCGTATCT GCAGCCAAAC GCGCTCACCC ACTGCTGGGG TTGTGTTAAA TGTGACTGAT 
GGACCAACGC CAACCACTAT CGAGCGACTG CCGGTTAAAT TATTAGAAAA CCAAAATGGG 
CATTACGTTG AAGTGACTGC CGTTAAAGGC ATTGATATCC AACAGCCCAC GGCGAGCGTG 
GTGGCCGCTG ATTTTGATAA TGACGGATGG ACGGACTTAT TGTTTATGCG ATACGGCAAC 
ATGGCGAAGC CTCACAAGCC AATTATGTAT CTGAACGATA AAGGAAATGG CTTCGTTGAG 
CATAAGGATC ACGGCATTGT TATTAACGAC TTAGGGGCAA CGGGAGCAGG CGCAGACGTT 
ATCGATTTCG ATAAAGACGG CGACCTTGAT CTCGTTACCG CCAATGAACG CGGCACATGG 
CGGCTCTTTG AAAATCACAC ATCCGGTCAA TCTAGCCATC ATTTTCTCGG TGTTATGGTA 
GGTGGCTCTC CGTCAGGTAA GGCGACGCAA TTGGCGGCTA AAGCGACGCT ACAAGCCTGC 
GGTAGACAAT GGCAGCAACA AGTAGGTGCC TCATCTTCTG CCTACGCAGA CTCCTACAAC 
AATCAGCTGT TGTTTGGTTT AGGAAACTGT ACACACGTGG AGAGCGTCAA AGTGCAGTGG 
AGCGATGGTG AAACAAAAGT CTATATACCC AATATGATTG ATGGGTATTT CGACACCACT 
GCAGCGCGGA GATAG 

 

Protein sequence

MMTFKISAQA FLLLGSSLIV MGCELPSRSS TNEAASQLLA QQSNQAQTLF SENQDALPSP 
KRASRKWDGP IVGDLDGDGW QDLLLTEHAD KILIFWNEKG KFSQPDTLQT GDMHGTGIAD 
FDNDGLLEVI IAQGGGNGSN PRKPKHIEIT KARQLTENRV LNHFEKGRGR AVKTLDANQD 
GSVDLFLTGF ATPEQAKAGA NHLYSNDGTG AFTFEGNLPY SQRLSYKTIV TNINDDDDPD 
VIIFGGGKMV AALGGPDFEF IDATKAVLGD AYKTTEVSAI AQLDYDNDGD LDLAISRAKH 
QFSHQLFYDK AQQRYAFFSR FQPLYIEELS INGNFHLVNL QMAYPDFDIY LGQNKSKLNI 
AGRKDIKSYE SDLSGSRALN IEPQQALGWP SDICPEGVKM KYLSPESKPG LYIGYLGDDK 
WRICSQTRSP TAGVVLNVTD GPTPTTIERL PVKLLENQNG HYVEVTAVKG IDIQQPTASV 
VAADFDNDGW TDLLFMRYGN MAKPHKPIMY LNDKGNGFVE HKDHGIVIND LGATGAGADV 
IDFDKDGDLD LVTANERGTW RLFENHTSGQ SSHHFLGVMV GGSPSGKATQ LAAKATLQAC 
GRQWQQQVGA SSSAYADSYN NQLLFGLGNC THVESVKVQW SDGETKVYIP NMIDGYFDTT 
AARR