| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0847 |
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| Symbol | |
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| ID | 4173988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 998845 |
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| End bp | 999897 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638053850 |
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| Product | aminocarboxymuconate-semialdehyde decarboxylase |
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| Protein accession | YP_660429 |
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| Protein GI | 109897174 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTACTG ATTGCTGTAC AGAGAAAAAT GTAATCACGG TGAATAAAAA AGGCACACAT
TTGGTTGTAG ACATTCATTG TCATTTGAAT GTAGCGGCAG CTGATAAAAT TGTGCAGGCT
AAGTATCCGG GCCCACCGCC AGGGATCCAT GAATTTTCAA GCCCTCAATC GAATGAGGTG
AACAAAGCGC AGTTTTGTAC AATCGGTCCG ACGCTTAACA ATATAAATTT ACGTATTGAG
GATATGGACA GACTAGGAGT GGACGTGCAA GTGATATCGC CCAATCCTGG CCAGTATTTC
TATTACACCG ATGCTGAGAC AGGTCTGGCA GCAGCCCAGG CCGTTAACAA TGGTATTGCT
GATGCCGTAA ACAGTCATCC TGAACGGTTT GTCGGTATGG GGACGTTACC TATGCAAGAT
ATCCCCTTGG CAATTGCAGA GATGAAACGT TGTGCACTAG AACTTAACCT TCGTGGTATT
GAGATCAGTA CCAATGTTAA TGGTAAAGAT TTACATCACG ACGAATTGCA GCCTTTTTTT
GCTGCCGCTG AACAACTTGG TATTTTACTT TTCATTCACC CTCTTGGTTT TACCCATGCT
CACCGAATGA AGGAATACTA TTTTAATAAC CTCATCGGCA ATCCGTTGGA ATCAACACTT
GCCGTGGGGC ATTTGATCTT CGGTGGCGTG TTAGACTGCT ACCCAAGTTT GAAAATTTGT
GTCGCCCATG GTGGTGGTTA TATTCCAGGT TACTGGGGGC GCATGGACCA TGGCTGGCGA
GCTCGCGCTG ATTGCAGTGA ACATTGTCAA CATCTCCCTT CAAGTTATTT ACGCAGACTA
TGGTTTGATA CTTTGGTGTT CGACAAAGAA CAGTTGGACT CCTTAGTGCG CACGCACGGT
TCAGATCGTC TCTGTCTGGG CAGCGACTAT CCATTTGATA TGGCTGAGCC TGATCCTGTG
GGGTTTCACA GTGAGCTATC TGAAACAGAT AAAGCCAAAA TTCTCGGCAT CAACGCAGCA
GAACTACTTG GGCTGACGGT TAAAAGTAGC TAG
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| Protein sequence | MSTDCCTEKN VITVNKKGTH LVVDIHCHLN VAAADKIVQA KYPGPPPGIH EFSSPQSNEV
NKAQFCTIGP TLNNINLRIE DMDRLGVDVQ VISPNPGQYF YYTDAETGLA AAQAVNNGIA
DAVNSHPERF VGMGTLPMQD IPLAIAEMKR CALELNLRGI EISTNVNGKD LHHDELQPFF
AAAEQLGILL FIHPLGFTHA HRMKEYYFNN LIGNPLESTL AVGHLIFGGV LDCYPSLKIC
VAHGGGYIPG YWGRMDHGWR ARADCSEHCQ HLPSSYLRRL WFDTLVFDKE QLDSLVRTHG
SDRLCLGSDY PFDMAEPDPV GFHSELSETD KAKILGINAA ELLGLTVKSS
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