| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0836 |
|---|
| Symbol | |
|---|
| ID | 4173977 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | + |
|---|
| Start bp | 984317 |
|---|
| End bp | 985264 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 638053839 |
|---|
| Product | PfkB |
|---|
| Protein accession | YP_660418 |
|---|
| Protein GI | 109897163 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0524] Sugar kinases, ribokinase family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.252584 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAT TACTCTTTGT CGGCGAATGT ATGCTCGAAC TAAGACGCGA TGAAAACGGT
CAAGTGCATA CTAGTTATGC TGGCGACACA TACAACAGTG CGGTTTATGC TAAGCGGACT
TGTCCTGAGT CTGAGGTCGC ATACTTGAGC GCTGTAGGGG ATGATGTGTT TAGCCAACAA
CTACTGAGTA ACATGGCAAC GGAGGGCATT GATAGCCATT TGGTTGGATG CAATCACGAA
CGCAATTTGG GCATTTATTC GATCACCACA GATAACAGCG GAGAGCGCTC CTTCGCATAC
TGGCGTGAGA ATTCAGCTGC AAAAAATATG CTTAAGCAAT GTAAAGAAAG CCTGATTGAT
GACGAAAATT TCGCTCTGAT ATTTTTTAGC GGAATTACTC TTGCGATCCT AGACCAGCAA
GACCGCCAGA AATTATTAAG CATATTGCAC AGGGCTAAAA GCAGGGGGGT AACAATAGCA
TTTGACCCAA ACTATCGTGC TCGTTTGTGG GCAGATAAAA CGGAAGCAAA GTATTGGCTA
GAGCAAGCTT ATGCTCTGGC GGATATTGCG CTTCCTGGCT TGGAAGATCA TGACGCTCTT
TTTCAGCATA CCGATGCTCA GCAAGTGCAT GACTTTCTTA ACCAGTTTGG TGTTCAAGAG
CAGGTGATAA AATGTGGAGT ACAAGGCACT TATGTCTACG ATCTCACTGG AATACAGTAT
CACCAACCGT TTAAGCCTGC AGCAATCCAG CGCGATACTA CAGGCGCGGG TGACTCGTTT
GCAGGCGCTT ACCTCGTGAC CCGATGTGAC GGTTTGAATA TAGAACAAGC CACTATGCGA
GCGTCCGAAT TGGCGCGCAC TGTAGTGCAG TTTTCAGGCG CAATTGTAGC ATCTGAATTA
ACGACTAACT CATTGTTCAG CGCATTAAGC AATGAAGTAA ATAGTTAA
|
|---|
| Protein sequence | MNKLLFVGEC MLELRRDENG QVHTSYAGDT YNSAVYAKRT CPESEVAYLS AVGDDVFSQQ
LLSNMATEGI DSHLVGCNHE RNLGIYSITT DNSGERSFAY WRENSAAKNM LKQCKESLID
DENFALIFFS GITLAILDQQ DRQKLLSILH RAKSRGVTIA FDPNYRARLW ADKTEAKYWL
EQAYALADIA LPGLEDHDAL FQHTDAQQVH DFLNQFGVQE QVIKCGVQGT YVYDLTGIQY
HQPFKPAAIQ RDTTGAGDSF AGAYLVTRCD GLNIEQATMR ASELARTVVQ FSGAIVASEL
TTNSLFSALS NEVNS
|
|---|
| |