| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0768 |
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| Symbol | |
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| ID | 4173946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 878245 |
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| End bp | 880236 |
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| Gene Length | 1992 bp |
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| Protein Length | 663 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638053770 |
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| Product | sulfotransferase |
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| Protein accession | YP_660350 |
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| Protein GI | 109897095 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGTACCA AGCATACATC CCAAGCCAAA CCATCGTTTA ATGAAGCGTG TAACGGGATA
AAACAACTTA TTCAACAGGC GAAATTTAGT CAGGCCATTG CGTTGTGTGA TCAGCAATTA
GCGAGTCATT TATCAAATAA TAATAGAGTT GAAATACTGT ATTTATTGGT CGTAGCTCAG
CGGTTAAATG GTGATTTAAG TGAGGCACTC GAGTCAAATA AAATCTTGCT GGAGGCAAAT
GCTAAGCACG CACGAGCTTG GCAAGAAAAC GGTTATTTGT ATCTCGCATT GCGTGAGCCA
CAACAGGCCG CTCAGTCTTT CTACCAAGCT ACGCAGTTAA ACCCCGCACT ACTGGCCAGC
TGGCGCGCAT TACTGCCGCT TTATCAACAG CAAGAAAATG CCAAAGCGGT GACAATCAGC
CAAGCACAAA TAGACTATTT ATCCGGGCTA CCTAATGCGG TGCTAGGTGC TAAAGATTTA
ATGTACGAAG GGAATTTATA CGCAGCTGAC AAAGTTTGTC GTCAGTTCTT ACAAGCTAAC
AAACACAACA GCGAGGCGAT GTTATTGCTC GCTGAAATCG GTATTCAGCT TAAAGTATAT
GGCGAGGCTG AATTTATTTT AAGCAGTTGT TTAGCGCTTT ACCCTGAACA CAAAGCGGCC
GGCATCGCGT ACCTTCAGCT GTTAGCCAAA ATGGCTAAAT TTGCCGAAGC AAAAGCCTTG
GCTGATAAGC TGCTGGCAGC CTCTGGCGAT AACGTCGTCC TGTTAAGTGC TAAGGCCAGT
GCTATGGTCG GGCTGGGGGA AGTGGAAGCA GCCATCTCAA TTTACCAAGA GTTGTTGCTA
AGAAACCAAA ACCAGCCGGG CATACAACTA TTGTTGGGAC ATGCGTTAAA AGCGTTAGGG
GATTTGCCAG GGGCAATCAA CGCTTACCAA CAGGCATATC GATACAAAGC TGAATTTGGT
GACGCATACT GGAGTTTAGC CAACACCAAA ACCTATCGCT TTAGCGATAC TGAGCTTGCT
GCAATGGAGC AACTTGTTGT TCAACAGAAT ATTGCGGTAG ATGACAGGGT ACATCTGCAT
TTCGCCTTAG GTAAGTCATT GGAAGACAGG GGCTCTTTTG ATGCTGCATT TTCACATTAT
GCCAAAGGTA ATCAGCTTAA ACAGCAACAG ATTAACTACA GTCCTGATGT GTTCGAGCGC
CAAGTAGCCA AGCAAATCGA CACCTGCCAA CCAGAACTAT TTGCACGTTT AAAAGAAGCT
GGCGAGCAAA GTCCTGATCC TATTTTCATT GTTGGTTTAC CCAGAGCGGG CTCGACGTTA
CTCGAGCAGA TACTCGCATC GCACTCTCAA GTTGATGGCA CTATGGAGCT GCACGATATT
CTTGGGCTGG CATCAAAATT ACAGGGTCAA AAAAATCAAT ATCCTCAGAT GTTGGCCGAT
TTGGATGAAA GCTATTTTGC TCGTTTTGGG CAGAAGTATT TGCAAGACAC ACAAGTGTAC
AGAGCCGGCG CGCCGTTTTT TATCGATAAA ATGCCGAACA ACTTTTTGCA CATAGGCCTA
ATCAAATTAA TCTTGCCTAA CGCCAAAATA ATCGACGCAA GACGCGATCC TATGGCGTGC
TGTTTTAGCG GCTTCAAGCA GTTATTTGGT GACGGGCAGG AGTTCTCATA CGGGCTAGAA
GAGATAGGCC GTTATTACCG CGCTTATGAA CAACTTATGA CCCATTGGGA CACAGTGTTG
CCAGGCTTCG TATTAACAGT GCAGCACGAA ACACTGATTG ATGACTTGCA TGGTCAAGTG
GAGCGGATTT TGGATTTTTG CGGATTACCG TTTGAGCAAC AGTGTATCGA TTTTCATAAG
ACTGAGCGGG CGATAAAAAC CCCCAGTTCA GAACAAGTCA GGCAGCCTAT ATACCGCTCA
GGCATGGAGC AATGGAAGCA CTTCGATGCT CATTTAGGAC CGTTGAAAAA GGTCTTGAAC
CATGACATGT AG
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| Protein sequence | MSTKHTSQAK PSFNEACNGI KQLIQQAKFS QAIALCDQQL ASHLSNNNRV EILYLLVVAQ
RLNGDLSEAL ESNKILLEAN AKHARAWQEN GYLYLALREP QQAAQSFYQA TQLNPALLAS
WRALLPLYQQ QENAKAVTIS QAQIDYLSGL PNAVLGAKDL MYEGNLYAAD KVCRQFLQAN
KHNSEAMLLL AEIGIQLKVY GEAEFILSSC LALYPEHKAA GIAYLQLLAK MAKFAEAKAL
ADKLLAASGD NVVLLSAKAS AMVGLGEVEA AISIYQELLL RNQNQPGIQL LLGHALKALG
DLPGAINAYQ QAYRYKAEFG DAYWSLANTK TYRFSDTELA AMEQLVVQQN IAVDDRVHLH
FALGKSLEDR GSFDAAFSHY AKGNQLKQQQ INYSPDVFER QVAKQIDTCQ PELFARLKEA
GEQSPDPIFI VGLPRAGSTL LEQILASHSQ VDGTMELHDI LGLASKLQGQ KNQYPQMLAD
LDESYFARFG QKYLQDTQVY RAGAPFFIDK MPNNFLHIGL IKLILPNAKI IDARRDPMAC
CFSGFKQLFG DGQEFSYGLE EIGRYYRAYE QLMTHWDTVL PGFVLTVQHE TLIDDLHGQV
ERILDFCGLP FEQQCIDFHK TERAIKTPSS EQVRQPIYRS GMEQWKHFDA HLGPLKKVLN
HDM
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