Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_0646 |
Symbol | |
ID | 4173000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 747008 |
End bp | 747874 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638053649 |
Product | hypothetical protein |
Protein accession | YP_660229 |
Protein GI | 109896974 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00955347 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTATGT TATCCCTTGT TTCCTTAACG TTTATCACGC TTATCGCCTT CGCGGCCAAT TCTGTGTTTT GCCGACTTGC GTTAGATGAG CAAAACATGG ATCCCATGAG TTTCACAGGG TTGCGCATTG CATCTGCGGC CTTGGTACTT GGCTTGATCA TGTTGGTAAA ATCACCTAAT AGTTTCCGCA GCTTAACGGC GTTAAATGCC TATGGTAGTT GGCGACAAGC AGGGTATCTT TTCGCTTATG CTGCTGGTTT TTCTTATGCT TACGTGACGC TACCAACCGC GACTGGCGCC TTGATATTAT TTGCTGCGGT GCAATTTACC ATGTTGTTTG TGTCCAGATT ATCGGGCAAC CGCATGCATG CTATCGCCAG CGCAGGGGTA GTCATTTCAT TGCTAGGGTT TGTGTATTTC GTTATGCCAG CGTTATCGTC ACCGAGCTTG GTAGGGGCGC TTGTCATGGC ATTGGCTGGT ATAGCATGGG GTCTGTATAG CTTAGCGGGG GCGAAATCGA CCCATGCATT AGAGTCTACC GGGGCAAACT TTATGCGCTG TTTGCCATTT GGACTGATAT TAATTGCGAT CTTTATGCCA ACAGCACGTT TAACGTTTGA AGGGGTGAGT TATGCGTTGG CATCGGGAGC ACTTGCCTCA GGTATTGGTT ATGCGATTTG GTATCAAGTA TTGCCCAAAT TAGATAGTAG TGTGGCGGCG GTGTGTCAGC TGTCAGTACC CATTATTGCG GCTTTTGGTG GAGTGTTGTT AGTCGCAGAG CCTATTACCT CACATTTATT GTTGTCATCG ATTGCTATTT TAGGCGGCAT GTTACTGGTG ATACTGGGTA AAAAGAAACG CGTTTAG
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Protein sequence | MSMLSLVSLT FITLIAFAAN SVFCRLALDE QNMDPMSFTG LRIASAALVL GLIMLVKSPN SFRSLTALNA YGSWRQAGYL FAYAAGFSYA YVTLPTATGA LILFAAVQFT MLFVSRLSGN RMHAIASAGV VISLLGFVYF VMPALSSPSL VGALVMALAG IAWGLYSLAG AKSTHALEST GANFMRCLPF GLILIAIFMP TARLTFEGVS YALASGALAS GIGYAIWYQV LPKLDSSVAA VCQLSVPIIA AFGGVLLVAE PITSHLLLSS IAILGGMLLV ILGKKKRV
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