Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_0526 |
Symbol | |
ID | 4173510 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 613208 |
End bp | 614350 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638053528 |
Product | hypothetical protein |
Protein accession | YP_660109 |
Protein GI | 109896854 |
COG category | [S] Function unknown |
COG ID | [COG3287] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGTTT TCAGTGATGT GCAATTTACC TCAAACGTTA CGGTTAAAGC ACTAGCCGAT AGTGTTGCTG AATTGATGCT GTCAAAGCCG AAGGGGATCA TGATCCTGTG CAGCGAAGAA GCGGCTTCTT GGGGAGACGA TTTTAAGCAA TATGTGGGTA CATTAGATGT GCCTATCTTC GGCGGGATAT TTCCAGGTCT TATCCTCGAC TCGCGCTTTG AGCCCCGCGG TATTTTAGTG GTTGGTTTGC GCAACAATAT TCGTGTTTGC GTCATTGAGA GTGTTTCAAC TTGTGCTCCA GTGTCGTCAA ACATGGCTTA TATGTCTCAG TCTGTGAATT CCGTGATGAT ATTGACTGAT GCGCTATCAA GGCAGATTGA TGGTTATCTG CAACATGTAC TGGCATTTCT ACCAGAAGAT TGCAGTGTCT TTGGAGGTGG AGCGGGAACG CTTGAATTCA AGGCGCAACC TTGCCTCTTT AGTGCTGCCG GCATGCATCA AGATGCGATG ATTTTAGTCG AAATGTCGAC TCATTGGGAT TTGTCCGTAG GCCATGGTTG GGAAATACTT GCAGGCCCAT TTCTGGCTAA CAGCACTGAT GATAACTGTG TGTTAGAGTT AAATTTTGAG CCTGCTGCGC AGCTATACGA GCGAGTCGTC CAGGAGCATA GTAAGCTGAG TTTCGACAAG CACGAATTTT TTGACATAGC GAAAACGTTC CCTTTCGGGT TGGCTAGGCT AGACGACGAA GTGCTTATTC GTGATCCTCT TAAACTGGAG GGTAGCGGGC TTGTTTGTGC AGGAGATATA CCTGAGAACA CCATGCTGTA CATCATGTGT GGAGATGCTG AAAAATTAAT AGCTGCGGCT TCTGGCGCAG TAAATCAAGC GCTTTCTACA CTAAATGATA CGCATGAAGT AACGGATTGC TTTTTGTTTG ATTGCGTTAG TAGGCAGTTG TTTTTGCAAG ATAAATTTGC CACAGAACTC GATTTGATTC ACCGAGAAAT AGCACCGCCG TACCGCACAG TTGGGGCGCT AGTATTAGGC GAGATAGAGC TAGGTGCGGG GGGGATTCTC AGTTTACATA ATAAAACGGC TGTTGCTGCC TTAGCTCGAG CGAGCAAGCA GGATGTGGTA TGA
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Protein sequence | MAVFSDVQFT SNVTVKALAD SVAELMLSKP KGIMILCSEE AASWGDDFKQ YVGTLDVPIF GGIFPGLILD SRFEPRGILV VGLRNNIRVC VIESVSTCAP VSSNMAYMSQ SVNSVMILTD ALSRQIDGYL QHVLAFLPED CSVFGGGAGT LEFKAQPCLF SAAGMHQDAM ILVEMSTHWD LSVGHGWEIL AGPFLANSTD DNCVLELNFE PAAQLYERVV QEHSKLSFDK HEFFDIAKTF PFGLARLDDE VLIRDPLKLE GSGLVCAGDI PENTMLYIMC GDAEKLIAAA SGAVNQALST LNDTHEVTDC FLFDCVSRQL FLQDKFATEL DLIHREIAPP YRTVGALVLG EIELGAGGIL SLHNKTAVAA LARASKQDVV
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