Gene Patl_0483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0483 
Symbol 
ID4172710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp558138 
End bp558566 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content41% 
IMG OID638053486 
Producthypothetical protein 
Protein accessionYP_660067 
Protein GI109896812 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTCCTC TCATCACTCG TTTTTTTAGT ATTGTTGCAC TGATTGTCGT TTCTCACTCA 
AGCCTCGCCT TGGTGGTTGT AGTCGGGAAA GGTAATACCC TTGATTCGTT GAGTAAAACG
CAGGTCATTG ATATCTACAT GGGTCGATAT AATACCTTCC CAAATGGTGT AGTAGCAAAA
CCGTTAGATC GCACTACTGG CAGTAATGAA AAGCAGCAGT TTTATCAATT ATTAGTCAAT
AAAAGTGAAG AGAAGATTAA TGCTTATTGG GCTCGCCTTC TGTTCTCAGG CCGCGCAAGT
CCACCGAGTA ATTTTCCTTC AAATGATGAA ATGCTTGATG AGCTTCGTCG CTCAGATAAA
GCGATTGGGT ATGTTCTAGA ATCAGAGGTG GATGATTCGT TAAAAGTCGT TTATCGTTTC
GAAGAGTAG
 
Protein sequence
MGPLITRFFS IVALIVVSHS SLALVVVVGK GNTLDSLSKT QVIDIYMGRY NTFPNGVVAK 
PLDRTTGSNE KQQFYQLLVN KSEEKINAYW ARLLFSGRAS PPSNFPSNDE MLDELRRSDK
AIGYVLESEV DDSLKVVYRF EE