| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0463 |
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| Symbol | |
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| ID | 4173236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 536200 |
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| End bp | 537858 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638053466 |
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| Product | amidohydrolase 3 |
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| Protein accession | YP_660047 |
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| Protein GI | 109896792 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.810621 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACATT CAGTCTTGAT ATTGTTAGGT TATTTGTTAA GTACAGCCAC ATTAGCCGCA
CCAACACACT TAACTAATGT GCATGGTTAC ACCCTTAGCG ATACAGAGGA GATGGTGACG
TTTACCGATA TGGTTTTCGA TGGCGGCAGA GTGTTAGCTA TTGGCGGCAC GAGCTTAAAA
AATACCTATC CTGATGCTGA TATGATTGAT GGAAAAAAGC GCGTATTACT GCCGGGCCTT
ATCGATGCCC ATGGGCACAT ACTGGGTTTA GGGGAAACTC TACTCGCAGT AGATGTCAGA
GATATTCCTA GTGCAAAAGC CTCCGCGCAA AAAGTGCGAG ATTACGCTCA GCAAAACCCT
GATTTAACAT GGATATTGGG CGGTGGCTGG AACCAAGTAC TTTGGGCCGA TAACGCATTT
CCAACCTCTG AGATGCTTGA CGAATATATT CAAGACCGTC CCGTGTGGAT AAGCCGAATA
GATGGACACG CTGGCTGGGC GAATAGCAAA GCATTGCAGA TAGCGGGAGT CACCAAAGAT
TCACTAGACC CACCAGGCGG CCAAATTGTC AGGGATAAAA ACGGTGTGCC TACTGGTGTA
CTAATTGATA ACGCCATGAA CATGCTAGTG GAAAAAATCC CTCAAGATAC CGAACAAGAT
TTGCAGCGCA AACTTGATGC TGCCGCAGCG CATTTGCTCT CACTGGGGAT CACCAGCACG
CACGATGCCG GTATTAATTA TGCTACCTAC CAATATTACA TTAAGCGCAG TCAGCAACTC
GATTTGAACA TGCGCATATA CGCCATGCTT GCAGCAACAG ATCCTAAGCT TGCAGACATG
CTCAACGCAG GTCCAATACA CGACCAATAC GATTACTTGT CAATCCGCAG CGTCAAAGTA
TACGGTGATG GTGCGCTTGG TAGCCGCGGT GCAGCCATGC TCTCTGGATA TTCAGACGAC
CATGAAAACA TTGGGCTATT ACTCACCCCT ATAAAGCAGC TCAAGCCATT ATTTGATTTA
ATCATAGGCA ATGGCTTTCA GCTTAATATT CATGAAATAG GTGACCGCGG TAATAGACTC
GCGCTGGATC AATTTGAAGA GACTTTTTCG CGTATCAAAG GGCAGCATTT GCGTAATCGT
GTAGAGCATG CACAAGTTAT CGATGTGACA GACATACCTA GATTCAAAAC CCTTGGAATA
ATTCCGTCCA TGCAGCCTAC ACACGCCACA AGTGATATGA ACATGGCCCA AGACCGAATT
GGTGAAGCGC GTTTAAAAGG CGCCTATGCT TGGCAAACTT TCGAAGAACA GGGATCTATT
GTTCCTTTTG GCTCTGATTT TCCTGTTGAA TTGGCCAACC CATTTTTCGG CTTACACGCT
GCAGTAACAA GACAGAATAG AAACAACCAG CCTGAGGCCG GTTGGATTAA AGAAGAAGCA
GTAACAGTGG AGCAGGCTTT TAAAGGATTC ACTTACAGCG GAGCCTATGC GGCTCACCAA
GAAAATAGCA TAGGTACTTT GTCATCTGGT AAGTGGGCTG ATTTTATCTT AGTCGACCAG
GATATATTCA CTATTAGCCC ACAGGATATA TGGAAAACCA AAGTACTTGA AACCTGGGTT
GGTGGTGTAA AACGCTATGA TAGCGCCCTG AATGACTAA
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| Protein sequence | MKHSVLILLG YLLSTATLAA PTHLTNVHGY TLSDTEEMVT FTDMVFDGGR VLAIGGTSLK
NTYPDADMID GKKRVLLPGL IDAHGHILGL GETLLAVDVR DIPSAKASAQ KVRDYAQQNP
DLTWILGGGW NQVLWADNAF PTSEMLDEYI QDRPVWISRI DGHAGWANSK ALQIAGVTKD
SLDPPGGQIV RDKNGVPTGV LIDNAMNMLV EKIPQDTEQD LQRKLDAAAA HLLSLGITST
HDAGINYATY QYYIKRSQQL DLNMRIYAML AATDPKLADM LNAGPIHDQY DYLSIRSVKV
YGDGALGSRG AAMLSGYSDD HENIGLLLTP IKQLKPLFDL IIGNGFQLNI HEIGDRGNRL
ALDQFEETFS RIKGQHLRNR VEHAQVIDVT DIPRFKTLGI IPSMQPTHAT SDMNMAQDRI
GEARLKGAYA WQTFEEQGSI VPFGSDFPVE LANPFFGLHA AVTRQNRNNQ PEAGWIKEEA
VTVEQAFKGF TYSGAYAAHQ ENSIGTLSSG KWADFILVDQ DIFTISPQDI WKTKVLETWV
GGVKRYDSAL ND
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