Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_0425 |
Symbol | |
ID | 4173716 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 502924 |
End bp | 504084 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638053428 |
Product | iron-containing alcohol dehydrogenase |
Protein accession | YP_660009 |
Protein GI | 109896754 |
COG category | [C] Energy production and conversion |
COG ID | [COG1454] Alcohol dehydrogenase, class IV |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATACAA ACAATGACTT TGAGTTCAAA ACCGTAGGCG ATATCCGTTT TGGGGTGAAT GCGGCTTTGT CTTTACCTGC ACTGTTGATA TCCCGCTTTG ATGCAAAATC GATTCTCGTC ATTACTGATA AAGGTTTATT AAACGCAGGT GTGCTTGATC CTGTTTTCGC TGAACTGGAT GTGGCTGGCA TAACATTCTC AGTGTTTGAT GGCGTGCAGG CTGACCCACC AGAAGCCATT ATTTTGGCGG CAGCTGAACA AGCGAAAAAA GCCGAAGTGG TGATTGGTAT TGGCGGCGGC AGCTCTATGG ACAGCGCTAA ACTCGCTGCT GTGTTGGCTA TGGAGCAACA AAACCTTGCC GACATGTACG GAGTCGATTT AGTCACGTCT CAGCGTAAAC CATTGGTATT GATACCTACT ACCGCAGGAA CAGGCTCAGA AGTTACCCCT ATCTCAATTG TCACCACGGG TGAATCAACC AAGGCTGGTG TGGTATCACC GGTTTTATAC CCCGATGTGG CGTTGCTTGA CCCTTGTCTA ACGGTGGGGT TACCAGCACA TATCACGGCA GAAACGGGCG TCGACGCTAT GGTGCACGCC ATTGAAGCTT TCACCAGCAA ACATAAGAAA AACCCGTTAT CAGATAATCT CGCGATAAAA GCATTGCAAT TGTTGTCGAC CCATCTTCCT CGTTGCTATG TAAACGGTAA AGACTTAGAT CACAGAGGCG CTACGCTATT GGGCGCCATG CTCGCAGGGC AGGCATTCGC TAACTCCCCA GTGGCGGCCG TGCACGCGTT GGCCTATCCA TTAGGCGGTA TTTATCATAT GGCTCACGGT TTAACGAATG CACTTATGCT GCCTCACGTG ATGCGTTTCA ACTTGGCACA CGCAGAGCAA GAATATGCCC AGTTAGGTGT AGTCGTTAAC CCTCAATTAG CTGGGCTTAG CGTGAGGGAG CAAGCACTGG GTTTTATTGA ATATATGCAG CAGTTTTGTC ACGACCTTGG CATCACCAAG CGACTAAGAG ATTACGGTAT TGAGCAAGCT GCGCTAACGG ATTTAGCCAA CGCGGCCATG CTGCAAACGC GATTGTTAAC CAATAATCCG CGAACGGTTA CGTTTGATGA TGCTCTCGCG TTATATCAAG AGGCGTGGTG A
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Protein sequence | MHTNNDFEFK TVGDIRFGVN AALSLPALLI SRFDAKSILV ITDKGLLNAG VLDPVFAELD VAGITFSVFD GVQADPPEAI ILAAAEQAKK AEVVIGIGGG SSMDSAKLAA VLAMEQQNLA DMYGVDLVTS QRKPLVLIPT TAGTGSEVTP ISIVTTGEST KAGVVSPVLY PDVALLDPCL TVGLPAHITA ETGVDAMVHA IEAFTSKHKK NPLSDNLAIK ALQLLSTHLP RCYVNGKDLD HRGATLLGAM LAGQAFANSP VAAVHALAYP LGGIYHMAHG LTNALMLPHV MRFNLAHAEQ EYAQLGVVVN PQLAGLSVRE QALGFIEYMQ QFCHDLGITK RLRDYGIEQA ALTDLANAAM LQTRLLTNNP RTVTFDDALA LYQEAW
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