| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0340 |
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| Symbol | |
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| ID | 4173163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 398533 |
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| End bp | 399909 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638053339 |
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| Product | protein of unknown function DUF513, hemX |
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| Protein accession | YP_659925 |
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| Protein GI | 109896670 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2959] Uncharacterized enzyme of heme biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAACC AATCAGATAC AAATAATTCA TCAGGCGGCA AGCCAAAGAG CGACACGCCT
CAAAATAAGC CAGAACAACC GAAAGATAAG TCCAGTAGCG CACCTTCAAA TGCGCCCTCG
AGTCCAGCAA CGAGCACAGC GTCCACAGCG GTAATAACAC CTGCTGCGCC AAAAGCGGAG
TCGGCTGATC ATGGCACGAA AAAGAATCCT ACAGCTCCTT TGAAAAGCGA CAACAACGTG
AAAAAAACGA CCAGTGCAAG CGATAGTTCG GGTACACCTA GTGCCACTTC CCCCACCAAA
AATCAAAAAA ATCAGAAGCC GGCCAAAACC GGTGTTTTGT GGTTTGTTAC TATCGTCAAT
CTGCTGATTT TATTATTGAT TGTGGCCGGT GCTTATTGGG GCTGGACACA GTGGGAGCAG
CAAAAGCAGA CTCAACAGTC GACCCAAAGT GAGCAACAAG ACATTCTAAC GCGCCAAGCG
CAGCAAAATC TGTCTATTAC TGATGAAGTG AAAGAGCAAA ATAGTCGTCT TGAATCACAG
CTACGTAGTG TCAACAAAGA GCTACAAAGC GCTCTTGAAG AGGCGGAGGC TGCGAACAAT
CAATCTCAGG CCAATAAGCA GATGCTAAGC AGTATCGCCG GTCGTCGCCC TGCTGATTGG
TTACTTGCTG AAGCAGACTT TTTAGTCCGC ATGGCGGGTC GTAAGTTGTG GTTAGAGCAT
GACCTAAAGA CCGCGATAGC CATGCTGCAG TCAGCTGATA GTCGCCTACA AGACTTAGAC
GACCCAAGCT TATTGCCCGT ACGAGAACGC TTAGCGAATG ACATTCAAAC TTTGGCTCAA
GTCAATCCTG TGTCGTTATC GTCTATCGCA TTGCAAATCA GTGCGCTGCT GTCCCAAGTT
GACCAGTTAC CACTTAATAC CTTCGAACGC CCTGATATCG CGCCCCAAGG CGGTGAGGAC
GTGTCCGATT CTGTCGATGA TTGGAAAGCC AACTTATCTC GCGCATGGGC AGCATTCACC
AAAGACTTCT TTAGCTATAA AAAGAAGGAA ATCGAAGTTC AGCCTTACAT GTCAGCACAG
CAACAATGGC TGGCGACTGA GCAACTAAAG CTTTCTTTGC TACAAGCCCA AAGCGCCGTG
TTGAAAGAGA GTGTTGAGCT TTATCAACAG TCATTGCAAA ACGCGCAACG GGTGCTAGAC
GAAAGCTTCG CTGTTGACGA GAGCGCAGTA GTGCAATTTG ACCAACGTAT TGAAGAATTG
GCTGAAACCG ATATTGAGCG CGTCTATCCA AGTCAGTTTA ATGCAGCCCC GGCGCTGCAA
GACATCATTC AGCAACGTAT CGACAATGTC TTCGTTAACG GAGCTAGCCA ACCATGA
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| Protein sequence | MANQSDTNNS SGGKPKSDTP QNKPEQPKDK SSSAPSNAPS SPATSTASTA VITPAAPKAE
SADHGTKKNP TAPLKSDNNV KKTTSASDSS GTPSATSPTK NQKNQKPAKT GVLWFVTIVN
LLILLLIVAG AYWGWTQWEQ QKQTQQSTQS EQQDILTRQA QQNLSITDEV KEQNSRLESQ
LRSVNKELQS ALEEAEAANN QSQANKQMLS SIAGRRPADW LLAEADFLVR MAGRKLWLEH
DLKTAIAMLQ SADSRLQDLD DPSLLPVRER LANDIQTLAQ VNPVSLSSIA LQISALLSQV
DQLPLNTFER PDIAPQGGED VSDSVDDWKA NLSRAWAAFT KDFFSYKKKE IEVQPYMSAQ
QQWLATEQLK LSLLQAQSAV LKESVELYQQ SLQNAQRVLD ESFAVDESAV VQFDQRIEEL
AETDIERVYP SQFNAAPALQ DIIQQRIDNV FVNGASQP
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