| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0301 |
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| Symbol | |
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| ID | 4172895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 351274 |
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| End bp | 352194 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638053300 |
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| Product | putative GTP cyclohydrolase |
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| Protein accession | YP_659887 |
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| Protein GI | 109896632 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1469] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.624443 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTATGA CATTACCGGA TATTACATCC AGCGAAAACG TGGCATCAGC CGCACCGCTT
AAATGGGTTG GCATGGAAGG CATAACCGTG CCTATTCAAG TACCAATGTC AGGTGAGGTG
CCAGCATATG TGAACGCGAA AACCGATGTG TATGTCAGTT TGGATAAAAG CGACGCGAAA
GGCATTCATA TGTCGCGTTT ATTCTTAAAA TTGAATGACA TTTTGGGTAC AGAGTTACTA
AGCAGCACTA GCCTTACAGC CTTGTTGAAT GAGCTAATTT TATCGCAACA GGGGCTCAGC
CAAGGGGCTA AGGTAAACTT AGACTTTGCG CTAACGCTTC GTAAAAAGGC GTTGCTAAGC
AATGAGTTTG GTTATCAGAG TTATCCTATT GGCATATCGA CTCAGTTGGT TAAAGGGGTA
GCGCGTACGG TTTTATCGTT AACCATTGCT TATTCAAGTA CGTGCCCGTG CTCATCTGCC
TTGGCTCAAC AAGCGCTAAG TGATGCTATC TCCCAGCGAT TTGACGATGA GATGATATCT
AAAAGCGAGC TAACCCAGTG GATAACGTCT AAAACAGGCG CCGTTGCTAC TCCACACAGT
CAACGTTCTT ATGCCTACAT CAAACTCACG CTAGATGGGG ATGCGCTGCC TAACTTGCCT
GAACTCATCA CATTGCTTGA AACAACAATT GGCACGCCAG TGCAAACCGC GGTAAAACGC
CAAGACGAGC AAGCATTTGC CAAATTAAAT GCTGAGAATT TGATGTTTTG CGAAGACGCT
GCAAGACGAT TGAAACGCGC CCTTGAGCGC AAGGAAAATG TACTCGATTA TTGGTTCAAA
GTGGAGCACC AAGAAAGCTT ACACGCACAC AATGCAGTGG CCATCGATTT CAAGGACAAC
GCCGATGAAG ACACTATGTA A
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| Protein sequence | MGMTLPDITS SENVASAAPL KWVGMEGITV PIQVPMSGEV PAYVNAKTDV YVSLDKSDAK
GIHMSRLFLK LNDILGTELL SSTSLTALLN ELILSQQGLS QGAKVNLDFA LTLRKKALLS
NEFGYQSYPI GISTQLVKGV ARTVLSLTIA YSSTCPCSSA LAQQALSDAI SQRFDDEMIS
KSELTQWITS KTGAVATPHS QRSYAYIKLT LDGDALPNLP ELITLLETTI GTPVQTAVKR
QDEQAFAKLN AENLMFCEDA ARRLKRALER KENVLDYWFK VEHQESLHAH NAVAIDFKDN
ADEDTM
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