| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0292 |
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| Symbol | |
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| ID | 4172925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 339963 |
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| End bp | 340988 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638053291 |
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| Product | LacI family transcription regulator |
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| Protein accession | YP_659878 |
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| Protein GI | 109896623 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00151755 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAAG TAAAACTTAT CGACGTTGCT CAGCTTGCTT CCGTCTCAAA AAGTACCGTA
TCTCAATACC TTAATGGCCG ATTTGACTAT ATGTCGAAGG AGACCCAAAT ACGCATTCGC
GCCGCAATCA AAGAATTGGA CTATGTACCG AATCCGATCG CGAGAAACTT AAAAGCTGAT
AAGACCAAGA CTATTGGGGT GATCGTGCGT GATATTACCG GCTTTGATAC CAGCAGAACG
ATCCGAGGAG TAGATGACTT TTGCAAAGGG TGTGATTACA ACGCGTTAAT TTACAACACA
GATTTTGACC CTGAAACCGA AGCAAAATCG CTTGAAGCGT TATACCAGAT GCGCGTCGAT
GGGATCATTA TTGCCTCGTC GGGACAGAAT AATACGTTAA TATCTGAGTA TATAGACAAG
GGCATGCCCA TAGTGCATTT TCAATTGGAG CATGATGGCA GTGAGAAAAA TTTGATCCTG
TCTGATTATC GACAAGCCGC TTTTGATGCC ACCGAATACT TAATCAAACT GGGTCATAAG
CGCATTTGCT TTATGACTCA AGATTTTAAG AATGTGAAAT CCAGAAACGA GCGCTACTCA
GGCTATGTCG CAGCCCTTAA AAAATACGAC ATTGTTCAAG ATCCTGCGTT AATCCAGTAC
TGGCAACGAG AAACAGGCTT TGATCACTCA CCAAAGAGTG TGCTTGAGTC AGCCGCCGCG
CCCACTGCTT TTTTTACCCA ACACTTGGCC ATTACCACCG AACTATTAAC GCACTTAAAT
CAAGAAAACA TCACTATACC CGATGACGTA TCCCTAATTG GGTTCGACGA TATCCCCATG
GCAGAGTTTT TCAAAGTCCC TGTGACCGTT ATCAAACAGG AGCCCTACAT CATAGGCAAA
GAAGCCGCCA AGCTATTACT AGAGAAGGTA AATGACAAAA ACAGGCATTC ACAGAAAATC
ATGATCTCTT GCTCTATCAC CGAAAGGCAA TCCTGCACTG CGCCAAAGGC AAAAAAATAC
AGCTAA
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| Protein sequence | MAKVKLIDVA QLASVSKSTV SQYLNGRFDY MSKETQIRIR AAIKELDYVP NPIARNLKAD
KTKTIGVIVR DITGFDTSRT IRGVDDFCKG CDYNALIYNT DFDPETEAKS LEALYQMRVD
GIIIASSGQN NTLISEYIDK GMPIVHFQLE HDGSEKNLIL SDYRQAAFDA TEYLIKLGHK
RICFMTQDFK NVKSRNERYS GYVAALKKYD IVQDPALIQY WQRETGFDHS PKSVLESAAA
PTAFFTQHLA ITTELLTHLN QENITIPDDV SLIGFDDIPM AEFFKVPVTV IKQEPYIIGK
EAAKLLLEKV NDKNRHSQKI MISCSITERQ SCTAPKAKKY S
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