| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0196 |
|---|
| Symbol | |
|---|
| ID | 4171742 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | + |
|---|
| Start bp | 234578 |
|---|
| End bp | 235192 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 638053195 |
|---|
| Product | glutathione S-transferase-like |
|---|
| Protein accession | YP_659782 |
|---|
| Protein GI | 109896527 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0625] Glutathione S-transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTT ATGCGGATGC ACAATCTGGC AATTGCTACA AAGTGAAATT GATGTGCGCG
TTATTGAATA TTGAGCACGA GTGGATCCAT GTTGATATAT TGGCCGGCGA CACCAATGCC
CACGCTTTTT TAGCCAAGAA CCCCAATGGA AAAATCCCCT TGCTTGCTTT GGATGATGGT
CGTCATTTAT GGGAATCAAA CGCCATTATT AATTATTTGG CCAATGGCAG TGACTTACTC
CCAAGCGACG TCTTTGCTTT AGCCAAAGTG CAGCAATGGC AGTTTTTCGA ACAATACAGC
CATGAACCTT ATATTGCTGT AGCGCGCTTT ATTGCTAAAT ATCTAGGCTT GCCCGAGAGT
AAAAAAGCCG AGTATGAAGC TAAGCAAGCG GGTGGGCACA AGGCGCTAGC TGTCATGGAG
TCACAGTTAA CCCATACACC ATTTTTAACG GGTCAGAGTG TCACGGCGGC TGATGTTAGC
TTGTATGGCT ATACACATGT CGCGCATGAA GGAGGATTTG ATTTGTCGCG GTACCCTAAT
GTGCAGGCGT GGTTATCTCG TATCGAGGCT TTGCCCAATT ACATCGCGAT GGATGCAAGC
AAGGGCAAAG CATAA
|
|---|
| Protein sequence | MKIYADAQSG NCYKVKLMCA LLNIEHEWIH VDILAGDTNA HAFLAKNPNG KIPLLALDDG
RHLWESNAII NYLANGSDLL PSDVFALAKV QQWQFFEQYS HEPYIAVARF IAKYLGLPES
KKAEYEAKQA GGHKALAVME SQLTHTPFLT GQSVTAADVS LYGYTHVAHE GGFDLSRYPN
VQAWLSRIEA LPNYIAMDAS KGKA
|
|---|
| |