| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0174 |
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| Symbol | |
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| ID | 4174038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 205667 |
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| End bp | 206884 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638053173 |
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| Product | type II secretion system protein |
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| Protein accession | YP_659760 |
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| Protein GI | 109896505 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAATT TCACCTACAA AGCGCGTAAC GCGAGTGGTG AACTGGCCTC AGGTAGCCTA
GAAGCGAGTG ATGCTTCTAG TGTGGCGCAA ATTTTACTTG GCCGAAAATT CACTCCAATT
GAAATAAAAG AAGTGAGTGA TTCTGCTAAC GTGACTCTGA ATTTATCCAT ATTCGCCCCG
AACATAAAGC TCGAAGATTT GGTTATTTTC TCGCGTCAAA TGTATTCGCT GACCAAATCT
GGCATTCCGA TAATTCGTTC AGTTAAGGGC TTGGCAGAGA CCTCGAACAG CGAACGCATG
ACAAAAATTT TGAATGATGT GTGTGATCAA TTAGAGCGAG GGCGCACGCT ATCTTCGGCC
CTGCATCGGC ATAATAAAGT TTTCGGTCAG TTATTTGTTA GCATTGTGCA CGTTGGGGAA
AATACCGGTA GGCTGGATGA AGCCTTTCTT CAATTGTCAG ACTATATGGA GCGCGAACAG
GAAACTAGAA AACAAATCAA AGCGGCTACA CGTTACCCAA CATTTGTGAT TTTGGCTGTC
GTCGCTGCTT TAATCATTAT GAATATATTT GTGATACCGG TCTTCGCCAA TATGTTCTCT
AGCTTTGGCG CTGAACTGCC GTTAATGACT CGCGTTTTAT TAGCTACATC AGATTTTTTT
ATTACAAAGT GGCTGCATAT GCTCATCTGC ATTGGCCTAG CGATCTTTTT AGTCTTTAAA
TATATCAACA CCCCAAAAGG CCGCTTTAAT TGGGATCGCG CCAAGTTACG TTTACCCATT
GTTGGGGGCA TATTTGAGCG CACTTTACTC AGTCGTTTTG CCCGTAGTTT TTCTATGATG
TTGCGCTCCG GGGTTCCATT AACCACTGCC CTAAATTTGG TTGCAGATGC CGTCAGCAAT
GCCTTCATGG CTGATAGGAT CGTGAAAATG CGCAAAAACA TCGAAAAAGG TGAAAGCCTT
TCACGGGTAG CAAGCTCAAG TAAGATGTTT ACGCCTTTGG TGCTACAGAT GATCAATGTA
GGTGAAGAAA CAGGCCGAGT AGATGAACTG CTAGGCGAAG CGGCCGAGTT TTACGAACGC
GAAGTGGATT ACGATTTGAA GAGCCTGACC TCTAAAATCG AGCCTATTCT TATTATGGTC
GTTGCCGCTA TGGTGCTGGT ACTGGCCTTG GGCATCTTTA CACCAATGTG GAACATGATG
GGAGCGATCC AAGGTTAA
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| Protein sequence | MANFTYKARN ASGELASGSL EASDASSVAQ ILLGRKFTPI EIKEVSDSAN VTLNLSIFAP
NIKLEDLVIF SRQMYSLTKS GIPIIRSVKG LAETSNSERM TKILNDVCDQ LERGRTLSSA
LHRHNKVFGQ LFVSIVHVGE NTGRLDEAFL QLSDYMEREQ ETRKQIKAAT RYPTFVILAV
VAALIIMNIF VIPVFANMFS SFGAELPLMT RVLLATSDFF ITKWLHMLIC IGLAIFLVFK
YINTPKGRFN WDRAKLRLPI VGGIFERTLL SRFARSFSMM LRSGVPLTTA LNLVADAVSN
AFMADRIVKM RKNIEKGESL SRVASSSKMF TPLVLQMINV GEETGRVDEL LGEAAEFYER
EVDYDLKSLT SKIEPILIMV VAAMVLVLAL GIFTPMWNMM GAIQG
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