| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0141 |
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| Symbol | |
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| ID | 4172168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 167383 |
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| End bp | 168615 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638053140 |
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| Product | major facilitator transporter |
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| Protein accession | YP_659727 |
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| Protein GI | 109896472 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.197109 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAGCCA TGAAATCGTT ACGCGCCCTA ACAGCAAACC CGCAATTCTT TCTATTGGCC
ATGGCATTTG TTATGCCACT GGTTTTTTCC GTTTGGAATG CCCTGTTAAA CAACTTTGTG
GTAGAAAAAG CCAGTTTTGA CGGGGCACAA ATTGGTATGC TGCAAAGCTT GCGTGAAGTG
CCGGGCTTCT TAGCTTTCAC CGCTGTATTC GTGCTGTTAG TGCTCAAAGA GCAAACCTTT
GCGTTAGTCT CATTAGCGGT GATGTGTGTC GGTGTGGCAT TAACCGGTTG GTTGCCGTTT
GAACTTGGCT TGTATTGCAC CACGGTGTTG ATGTCTATCG GTTTTCATTA TTTTGAAACC
ATCAATCAGT CGTTAACATT ACAATGGCTT GATAAAGACA AAAGTGCGCA TTTTATGGGG
CAACAGCTTG CGGTAAAGAG TTTTGCCTCG TTGCTGGCCT ACGGTGCTAT TTGGTTACTG
ATGGAGTGGG TTGGTATTTC CTATATGGCA ATGTACATGC TTGCTGGTGG CGTAGGGTTA
CTGATCGTGA TTTGGTTATG GTTCGCGTTT GATAAATTCA ATCAAACGTC TGTCCAACAC
AAGCATATGT TTTTACGCAA ACGTTATTGG TTGTATTATG GTTTAGTGTT TTTCAGTGGT
GCTCGGCGGC AAATTTTCAT GGTGTTTGCC TCCTTTATGA TGGTAGAAAA ATTTGGTTAT
TCGGTAGGGG ATATCAGCAT ACTGTATATG CTCAACTATG TATTTAACTT ATTTTTTGCC
CCTAAAATTG GACGCTGGAT CCACAAAATC GGCGAGCAGC GCGCGCTGTG CATTGAATAT
CTAGGCCTGC TGTGTGTGTT TGTTGGTTAT GCCTTGGTAG AAAACAGCCA ATTAGCTGCA
GGGTTATATG TCATCGACCA CTTATTTTTT GCCATGGCAA TTGCTGTCAA AACCTACTTC
CAGAAAATTG CCGACCACAG GGATATTGCT TCAACCGCGG GTGTCAGTTT TACTATCAAT
CATATCGCGG CTGTTGTGAT CCCGGCATTG TTGGGTATTG TATGGTTAAC CTCTCCTTCC
TTGGTATTTT ATATTGGCGC AGGGTTTGCG ATTTGTTCTT TAATTTTGGC GTTAAACATT
CCTTTGCAGC CTACCAGTGG TAAAGAAGTC AGAGTTAATT TATTACGTTG GGCTAACATG
CCCGTTGGAA TTTCGCCTAA GGAGCGTTCA TGA
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| Protein sequence | MKAMKSLRAL TANPQFFLLA MAFVMPLVFS VWNALLNNFV VEKASFDGAQ IGMLQSLREV
PGFLAFTAVF VLLVLKEQTF ALVSLAVMCV GVALTGWLPF ELGLYCTTVL MSIGFHYFET
INQSLTLQWL DKDKSAHFMG QQLAVKSFAS LLAYGAIWLL MEWVGISYMA MYMLAGGVGL
LIVIWLWFAF DKFNQTSVQH KHMFLRKRYW LYYGLVFFSG ARRQIFMVFA SFMMVEKFGY
SVGDISILYM LNYVFNLFFA PKIGRWIHKI GEQRALCIEY LGLLCVFVGY ALVENSQLAA
GLYVIDHLFF AMAIAVKTYF QKIADHRDIA STAGVSFTIN HIAAVVIPAL LGIVWLTSPS
LVFYIGAGFA ICSLILALNI PLQPTSGKEV RVNLLRWANM PVGISPKERS
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